Factsheet for GSMUA_Achr5P10280_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31009	Sorghum	nucleus	63.24	61.21
HORVU6Hr1G066000.1	Barley	nucleus	63.24	60.78
TraesCS6B01G266800.3	Wheat	nucleus	63.6	60.49
Zm00001d017609_P011	Maize	nucleus	60.66	60.44
GSMUA_Achr7P17560_001	Banana	nucleus	66.54	60.33
GSMUA_Achr7P04620_001	Banana	nucleus	59.19	60.3
TraesCS6D01G239800.1	Wheat	nucleus	63.24	60.14
Os02t0680700-01	Rice	nucleus	63.6	59.45
KRH08856	Soybean	nucleus	59.93	54.15
Solyc06g036300.2.1	Tomato	nucleus, plastid	58.82	53.16
KRH35235	Soybean	nucleus	59.93	52.24
HORVU0Hr1G031850.1	Barley	nucleus, plastid	63.24	51.65
VIT_16s0050g01180.t01	Wine grape	nucleus	63.24	51.04
GSMUA_Achr1P03720_001	Banana	nucleus	64.34	50.87
Bra003117.1-P	Field mustard	nucleus	56.62	50.33
CDY52837	Canola	nucleus	56.62	50.33
TraesCS6A01G258600.2	Wheat	nucleus	63.24	50.29
Bra029111.1-P	Field mustard	nucleus	58.09	49.38
PGSC0003DMT400074344	Potato	plastid	52.21	49.13
KRG91589	Soybean	nucleus	59.19	48.94
CDY56155	Canola	nucleus	58.09	48.92
GSMUA_Achr10P...	Banana	nucleus	15.07	48.81
AT5G52660.2	Thale cress	nucleus	57.72	47.43
CDY27841	Canola	nucleus	48.9	46.5
CDY51831	Canola	vacuole	58.46	45.69
KRH38371	Soybean	nucleus	58.46	45.04
GSMUA_Achr1P06480_001	Banana	plastid	63.97	40.47
GSMUA_Achr1P15370_001	Banana	mitochondrion	16.91	37.7
GSMUA_Achr3P17770_001	Banana	nucleus	31.62	35.98
GSMUA_Achr8P13440_001	Banana	nucleus	25.74	18.47
GSMUA_Achr11P...	Banana	nucleus	25.74	14.64
GSMUA_AchrUn_...	Banana	nucleus	24.63	14.35
GSMUA_AchrUn_...	Banana	nucleus	24.63	11.15
GSMUA_Achr1P06360_001	Banana	nucleus	28.31	10.61
GSMUA_Achr10P...	Banana	nucleus	12.87	5.79

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr5G10280_001	EnsemblPlants:GSMUA_Achr5P10280_001	EnsemblPlants:GSMUA_Achr5T10280_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0SXA7
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000295C1D1	SEG:seg

Description

Putative Myb-like protein G [Source:GMGC_GENE;Acc:GSMUA_Achr5G10280_001]

Coordinates

chr5:+:7335880..7345978

Molecular Weight (calculated)

29863.7 Da

IEP (calculated)

9.412

GRAVY (calculated)

-0.445

Length

272 amino acids

Sequence
(BLAST)

001: MSLTGPVSSP AGTLSDEAAK KIRKPYTITK SRESWTEQEH DKFLEALQLF DRDWKKIEAF VGSKTVIQIR SHAQKYFLKV QKNGNGAHVP PPRPKRKAAH
101: PYPQKASKNG IAAPPLARPI PLQTSFLLER GYALGTDSSS KLRNSTTEGI KSGGAIVVDN CCSSSTGSPR GSLPNCEKNC QGNQVPSLRV MPDFIQVYNF
201: LGSVFDPSTS CHLQKLREMD PLDVETVLLL MRNLSINLTS PDFEDHIKLL STHGSDLVEP KPASVDNLLI AN

Best Arabidopsis Sequence Match ( AT5G52660.1 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKGAGAN NNCSSSSENT PRPRSNRDAR DHGNVGHSLR VLPDFAQVYG FIGSVFDPYA SNHLQKLKKM DPIDVETVLL LMRNLSINLS SPDFEDHRRL
301: LSSYDIGSET ATDHGGVNKT LNKDPPEIST

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.