Factsheet for GSMUA_Achr8P13440_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	14.51	65.48
GSMUA_AchrUn_...	Banana	nucleus	40.11	32.55
GSMUA_Achr11P...	Banana	nucleus	39.31	31.17
TraesCS6D01G241900.1	Wheat	nucleus	36.15	30.51
TraesCS6B01G288500.1	Wheat	nucleus	35.88	30.36
TraesCS2B01G478700.1	Wheat	nucleus	32.72	29.88
TraesCS2D01G456900.1	Wheat	nucleus	32.72	29.81
Zm00001d051480_P001	Maize	nucleus	30.87	29.62
TraesCS2A01G456600.1	Wheat	nucleus	32.45	29.43
EES05718	Sorghum	nucleus	34.3	28.57
TraesCS6A01G261100.1	Wheat	nucleus	35.62	28.54
Os04t0583900-01	Rice	nucleus	34.56	28.29
Solyc03g098320.2.1	Tomato	nucleus	32.72	27.07
Os02t0685200-01	Rice	nucleus	34.83	26.88
EES12724	Sorghum	nucleus	31.4	26.86
Zm00001d017642_P001	Maize	nucleus	32.72	26.55
PGSC0003DMT400065850	Potato	nucleus	32.45	26.39
Zm00001d002545_P002	Maize	nucleus	30.61	26.36
HORVU2Hr1G104580.2	Barley	nucleus	31.66	25.97
GSMUA_Achr5P10280_001	Banana	nucleus	18.47	25.74
GSMUA_Achr7P17560_001	Banana	nucleus	20.32	25.67
GSMUA_Achr7P04620_001	Banana	nucleus	17.94	25.47
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	35.36	24.77
Zm00001d026017_P001	Maize	nucleus	29.02	24.28
GSMUA_AchrUn_...	Banana	nucleus	31.13	19.63
GSMUA_Achr1P03720_001	Banana	nucleus	17.41	19.19
GSMUA_Achr3P17770_001	Banana	nucleus	11.61	18.41
GSMUA_Achr1P06480_001	Banana	plastid	19.79	17.44
GSMUA_Achr1P15370_001	Banana	mitochondrion	5.54	17.21
GSMUA_Achr1P06360_001	Banana	nucleus	31.66	16.53
GSMUA_Achr10P...	Banana	nucleus	19.0	11.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G13440_001
EnsemblPlants:GSMUA_Achr8P13440_001	EnsemblPlants:GSMUA_Achr8T13440_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0TQ47	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002960E3B	SEG:seg	:

Description

MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G13440_001]

Coordinates

chr8:-:10184261..10186083

Molecular Weight (calculated)

41429.7 Da

IEP (calculated)

8.382

GRAVY (calculated)

-0.527

Length

379 amino acids

Sequence
(BLAST)

001: MDVDAKTSSM SIPRSKEIDS PVTEQAPRVS SIVRKPYTIT KQRERWTEEE HNKFLEALQQ YGRAWRRIEE HIGTKTAVQI RSHAQKFFSK VNCCFSNYLS
101: IPPPRPKRKP VHPYPRKLSH SSNKEIPALK QLERPRLQSP IICEQDNRSP TSVLSAVGSE TMGSVFSIGQ NGCSSPVIDH CPNAYTSSEA PLPTLKLFGK
201: MVVVTDSNVS SASGAANITQ PQPTSSPPPL LYRFPLVGGH SVEPTFLSPP WWSIYGNLPF SYIDLQPQYP LQFGMEAAGN EDMQREGSWT GSNTASTSGA
301: GLTDPNAVVV NSNKAENVAE SDSMPCTSLK PSSIPASRRG SGGSGRGFVP YNRCAVESEV QQSVTASEDG ESQAIRLCL

Best Arabidopsis Sequence Match ( AT5G37260.1 )
(BLAST)

001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW

Arabidopsis Description

RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.