Factsheet for Zm00001d051480_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024547_P001	Maize	peroxisome	9.87	65.0
EES05718	Sorghum	nucleus	73.16	63.52
Zm00001d017642_P001	Maize	nucleus	72.91	61.67
TraesCS6D01G241900.1	Wheat	nucleus	54.94	48.33
TraesCS6B01G288500.1	Wheat	nucleus	54.68	48.21
Os02t0685200-01	Rice	nucleus	57.97	46.64
TraesCS6A01G261100.1	Wheat	nucleus	53.16	44.4
Zm00001d015487_P001	Maize	nucleus	7.85	39.74
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	53.92	39.37
Zm00001d002545_P002	Maize	nucleus	37.47	33.64
Zm00001d023295_P001	Maize	nucleus	7.59	31.58
GSMUA_Achr8P13440_001	Banana	nucleus	29.62	30.87
Zm00001d026017_P001	Maize	nucleus	35.19	30.68
Zm00001d034945_P001	Maize	mitochondrion, nucleus	12.41	28.66
Zm00001d034947_P001	Maize	mitochondrion	12.15	28.57
Zm00001d034946_P001	Maize	mitochondrion	12.15	28.57
Zm00001d017609_P011	Maize	nucleus	18.48	26.74
Zm00001d014863_P002	Maize	nucleus	28.1	25.69
Solyc03g098320.2.1	Tomato	nucleus	28.86	24.89
PGSC0003DMT400065850	Potato	nucleus	29.11	24.68
GSMUA_AchrUn_...	Banana	nucleus	28.1	23.77
GSMUA_Achr11P...	Banana	nucleus	27.59	22.8
Zm00001d045581_P002	Maize	nucleus	17.47	21.84
Zm00001d039785_P001	Maize	nucleus	15.19	21.35
Zm00001d046974_P002	Maize	nucleus	17.97	21.07
Zm00001d036632_P002	Maize	nucleus	18.73	20.61
Zm00001d049543_P003	Maize	nucleus	29.87	16.39
Zm00001d024546_P001	Maize	nucleus	17.47	10.41
Zm00001d044969_P001	Maize	cytosol	1.77	7.45
Zm00001d032105_P001	Maize	plastid	1.77	5.51
Zm00001d011020_P001	Maize	extracellular	2.28	4.43
Zm00001d012051_P001	Maize	plastid	1.52	4.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	UniProt:A0A1D6Q754	ProteinID:AQK54317.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI00084567B9	EnsemblPlantsGene:Zm00001d051480	EnsemblPlants:Zm00001d051480_P001	EnsemblPlants:Zm00001d051480_T001	SEG:seg

Description

MYB-related-transcription factor 58Protein REVEILLE 1

Coordinates

chr4:-:160038260..160042852

Molecular Weight (calculated)

42852.5 Da

IEP (calculated)

10.478

GRAVY (calculated)

-0.671

Length

395 amino acids

Sequence
(BLAST)

001: MATGETAVDR REDPRDMDLS GEEHVRPKVQ RRLQIPWRSA CSHSFLPRLP DQARKPYTIT KRRERWTEEE HGRFLEALQL HGRAWRRIQE HIGTKTAVQI
101: RSHAQKFFTK VVRESSPGSN ASAGAAPAIQ IPPPRPKRKP AHPYPRKADG AAKKPAPELK RLEKTSLRDR VRDEGSPTSV LASARTALRA EVLCDAHEVS
201: RLGSGAPVVK LFGNKVVVVK VKDLETDTPP ASVAEAARNG SPTNGAAGAS SWKPWPELTC LVPRRDGFAA QPIVSPPCAV FYYPQASAQE HQQASEPLDH
301: RRAQREGSSP TGSSVASSAA AESRHGPGQE NASDGYAALR AAIPRPTKRA SSASFGGRGF VPYKRCAAES EAARPVALAL APGEEADGDL TRLCL

Best Arabidopsis Sequence Match ( AT3G10113.1 )
(BLAST)

001: MVMMIIIYTE PEISLFPLQD RSEELSSNVE NGSCNSNEGI NPETSSHWIE NVVKVRKPYT VTKQREKWSE EEHDRFLEAI KLYGRGWRQI QEHIGTKTAV
101: QIRSHAQKFF SKMAQEADSR SEGSVKAIVI PPPRPKRKPA HPYPRKSPVP YTQSPPPNLS AMEKGTKSPT SVLSSFGSED QNNYTTSKQP FKDDSDIGST
201: PISSITLFGK IVLVAEESHK PSSYNDDDLK QMTCQENHYS GMLVDTNLSL GVWETFCTGS NAFGSVTEAS ENLEKSAEPI SSSWKRLSSL EKQGSCNPVN
301: ASGFRPYKRC LSEREVTSSL TLVASDEKKS QRARIC

Arabidopsis Description

RVE7LProtein REVEILLE 7-like [Source:UniProtKB/Swiss-Prot;Acc:F4J2J6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.