CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017642_P001	Maize	nucleus	80.44	78.37
Zm00001d051480_P001	Maize	nucleus	63.52	73.16
Os02t0685200-01	Rice	nucleus	63.52	58.86
TraesCS6B01G288500.1	Wheat	nucleus	57.14	58.04
TraesCS6D01G241900.1	Wheat	nucleus	57.14	57.91
TraesCS6A01G261100.1	Wheat	nucleus	55.82	53.7
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	56.26	47.32
EES12724	Sorghum	nucleus	35.16	36.12
GSMUA_Achr8P13440_001	Banana	nucleus	28.57	34.3
KXG20957	Sorghum	nucleus	28.35	29.72
KXG31009	Sorghum	nucleus	17.58	28.47
OQU91224	Sorghum	mitochondrion, nucleus	11.43	27.51
Solyc03g098320.2.1	Tomato	nucleus	27.03	26.86
PGSC0003DMT400065850	Potato	nucleus	27.25	26.61
GSMUA_Achr11P...	Banana	nucleus	26.81	25.52
GSMUA_AchrUn_...	Banana	nucleus	26.15	25.48
KXG20579	Sorghum	nucleus	18.24	24.48
EER89043	Sorghum	nucleus	16.26	23.34
EES13385	Sorghum	nucleus	28.79	17.54
OQU86282	Sorghum	nucleus	14.51	17.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EntrezGene:8073204	UniProt:C5Y0W4	EnsemblPlants:EES05718	ProteinID:EES05718
ProteinID:EES05718.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF60
InterPro:SANT/Myb	SMART:SM00717	EnsemblPlantsGene:SORBI_3004G279300	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0001A85E7B
RefSeq:XP_002452742.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:62205986..62209047

Molecular Weight (calculated)

48148.0 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.646

Length

455 amino acids

Sequence
(BLAST)

001: MATGDTAVDQ RKDPLDPRDM DSSGEEHVPK ARKPYTITKQ REKWTEDEHR RFLEALQLHG RAWRRIQEHI GTKTAVQIRS HAQKFFTKVV RESSSGSNNA
101: STGAAPAIQI PPPRPKRKPA HPYPRKVDGG AAKKPAPELK QLEKPPLPLR DQDEGSPTSV LTSAHMVLRA AEGLGSVFAN SSSTASRSAA LSAAGSDERG
201: NGGGSLTSSV DGDGEDACAS PRTRAPYTKV LGDANEVGSE APILKLFGKK VVVEEDLKTD SSPASAVQAT RTGNPIAAAG ASSWNPWQGS VQVQQLMYLV
301: PQPDGFAAQP AVVPWFGYNG GLPCAVFYPQ AVASAPEQQQ QQQASEPLDH RRAQREGSLT GSNMAASSAA ASAAQNSDTA ESSRQGPGGH ENTSDGYAAL
401: RRAAAVPRLT KCASSASLSG RGFVPYKRCA AESEAPRPVA ARGEEADGEM TRLCL

Best Arabidopsis Sequence Match ( AT5G37260.1 )
(BLAST)

001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW

Arabidopsis Description

RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.