Factsheet for GSMUA_Achr11P01420_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	11.72	66.67
GSMUA_AchrUn_...	Banana	nucleus	58.37	59.74
GSMUA_Achr8P13440_001	Banana	nucleus	31.17	39.31
Zm00001d051480_P001	Maize	nucleus	22.8	27.59
EES05718	Sorghum	nucleus	25.52	26.81
GSMUA_Achr7P04620_001	Banana	nucleus	14.85	26.59
TraesCS6B01G288500.1	Wheat	nucleus	24.48	26.12
TraesCS2A01G456600.1	Wheat	nucleus	22.59	25.84
TraesCS6D01G241900.1	Wheat	nucleus	24.27	25.84
GSMUA_Achr5P10280_001	Banana	nucleus	14.64	25.74
TraesCS2B01G478700.1	Wheat	nucleus	22.18	25.54
Zm00001d017642_P001	Maize	nucleus	24.9	25.48
TraesCS2D01G456900.1	Wheat	nucleus	21.97	25.24
EES12724	Sorghum	nucleus	23.22	25.06
Os04t0583900-01	Rice	nucleus	24.27	25.05
Solyc03g098320.2.1	Tomato	nucleus	23.85	24.89
Os02t0685200-01	Rice	nucleus	25.52	24.85
TraesCS6A01G261100.1	Wheat	nucleus	24.27	24.52
Zm00001d002545_P002	Maize	nucleus	22.38	24.32
PGSC0003DMT400065850	Potato	nucleus	23.43	24.03
GSMUA_Achr7P17560_001	Banana	nucleus	15.06	24.0
HORVU2Hr1G104580.2	Barley	nucleus	22.8	23.59
Zm00001d026017_P001	Maize	nucleus	21.97	23.18
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	24.69	21.81
GSMUA_AchrUn_...	Banana	nucleus	25.1	19.97
GSMUA_Achr1P03720_001	Banana	nucleus	14.23	19.77
GSMUA_Achr3P17770_001	Banana	nucleus	9.62	19.25
GSMUA_Achr1P06360_001	Banana	nucleus	26.99	17.77
GSMUA_Achr1P06480_001	Banana	plastid	15.06	16.74
GSMUA_Achr1P15370_001	Banana	mitochondrion	3.77	14.75
GSMUA_Achr10P...	Banana	nucleus	14.85	11.76

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G01420_001
EnsemblPlants:GSMUA_Achr11P01420_001	EnsemblPlants:GSMUA_Achr11T01420_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0RNH2	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000294EBC1	SEG:seg	:

Description

MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G01420_001]

Coordinates

chr11:-:967380..969150

Molecular Weight (calculated)

52445.7 Da

IEP (calculated)

7.314

GRAVY (calculated)

-0.649

Length

478 amino acids

Sequence
(BLAST)

001: MLYILGRETY LKSASKIGLL CDQEQQQPVC NSHNQMHVDA KTPIPQSKEI DSSGEEQAPR VRKPYTITKQ REKWTEEEHS KFLEALQLYG RAWRRIEEHI
101: GTKTAVQIRS HAQKFFSKVV RESGSNDSTV TLKAIEIPPP RPKRKPLRPY PRKSGNSSSK ETPAALKQLE RPPLQTHTIC EEENRSPTSV LSAVGSEALG
201: SMFSNSQNIC SSPAASAAGS NDQDNGGQLT TMTVQEKHKL PRFGPRLDQS SMVIDQCSDM HTSPEAQVPA LKLFGKMVVL TDLNKSSAPS NGNAAKAKLT
301: VAVDTKEWQE NKAFDLNSKL EMCLQSAAHG VPPRDSTRSA WNAYPGVIPP MFYCFPLVGE DSVEHMFLPP PWSMYGDLPF PFVYPQLQHP QQSPMEAAGE
401: QEMQGEGSWS GSNTASTSGW GLSDQNVDGV DSKKAAKAGG GSSARGFVPY RRCAIESEAQ HSATVSDDGE GQAIRLCL

Best Arabidopsis Sequence Match ( AT5G17300.1 )
(BLAST)

001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL

Arabidopsis Description

RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.