Factsheet for TraesCS2B01G478700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G456600.1	Wheat	nucleus	96.39	95.69
TraesCS2D01G456900.1	Wheat	nucleus	95.66	95.43
HORVU2Hr1G104580.2	Barley	nucleus	89.88	80.74
Os04t0583900-01	Rice	nucleus	62.17	55.72
EES12724	Sorghum	nucleus	53.49	50.11
Zm00001d002545_P002	Maize	nucleus	52.29	49.32
Zm00001d026017_P001	Maize	nucleus	49.88	45.7
TraesCS6B01G288500.1	Wheat	nucleus	38.07	35.27
GSMUA_Achr8P13440_001	Banana	nucleus	29.88	32.72
TraesCS7B01G478200.1	Wheat	nucleus	29.88	25.67
TraesCS6B01G266800.3	Wheat	nucleus	17.35	25.17
Solyc03g098320.2.1	Tomato	nucleus	27.23	24.67
PGSC0003DMT400065850	Potato	nucleus	26.27	23.39
GSMUA_AchrUn_...	Banana	nucleus	25.06	22.27
GSMUA_Achr11P...	Banana	nucleus	25.54	22.18
TraesCS7B01G372500.1	Wheat	nucleus	17.83	21.7
TraesCS1B01G129800.1	Wheat	mitochondrion	11.33	21.27
TraesCS3B01G151500.1	Wheat	nucleus	13.73	19.93
TraesCS7B01G188000.1	Wheat	nucleus	27.95	15.68

Protein Annotations

EnsemblPlants:TraesCS2B01G478700.1	EnsemblPlantsGene:TraesCS2B01G478700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF45	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	:	:

Description

No Description!

Coordinates

chr2B:+:676024022..676025776

Molecular Weight (calculated)

45026.6 Da

IEP (calculated)

7.526

GRAVY (calculated)

-0.689

Length

415 amino acids

Sequence
(BLAST)

001: MARFQETKPD LLNSGSDTRM MAEARLPKAR KPYMITKQRE KWTEEEHKLF LEAMQLHGRA WRRIQEHIGT KTAVQIRSHA QKFFSKVTRD SSGDSGGSSS
101: GAGPPIQIPP PRPKRKSVHP YPCNLRSAQP GKHAHAALLR VDKPQLSMCE QGNGSPTSVV TTSQIGLGSE SFDSDTSTID IEERCPTPST GTAEVAVQAP
201: PTNDAKKSKG SSTSEEVVCD NTSDAPVLKL FGKTVVVNES HQLPSPGTCD LQTAADMELD TSAETPTSAP EANTWSPWLA NSQQFMYYVP QGAVFFGYNN
301: GSVPYPVPSS PKAGQQHQQQ ASEAAAELRR REASLNTASS SVAETTARNS AESCTGAVGG DDEVVHAAGL RERVSPTLVQ QRGFMPYKRC AAETKAMQPQ
401: APREEADREM TRLCL

Best Arabidopsis Sequence Match ( AT1G18330.2 )
(BLAST)

001: MLCFVRFQAG FVRIIVAARK RFRYFLMAAE DRSEELSSNV ENGSCNSNEG INPETSSHWI ENVVKVRKPY TVTKQREKWS EEEHDRFLEA IKLYGRGWRQ
101: IQEHIGTKTA VQIRSHAQKF FSKMAQEADS RSEGSVKAIV IPPPRPKRKP AHPYPRKSPV PYTQSPPPNL SAMEKGTKSP TSVLSSFGSE DQVNRCSSPN
201: SCTSDIQSIG ATSIDKKNNY TTSKQPFKDD SDIGSTPISS ITLFGKIVLV AEESHKPSSY NDDDLKQMTC QENHYSGMLV DTNLSLGVWE TFCTGSNAFG
301: SVTEASENLE KSAEPISSSW KRLSSLEKQG SCNPVNASGF RPYKRCLSER EVTSSLTLVA SDEKKSQRAR IC

Arabidopsis Description

RVE7Protein REVEILLE 7 [Source:UniProtKB/Swiss-Prot;Acc:B3H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.