Factsheet for Zm00001d026017_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12724	Sorghum	nucleus	76.82	78.56
Zm00001d002545_P002	Maize	nucleus	72.41	74.55
Zm00001d024547_P001	Maize	peroxisome	7.28	55.0
Os04t0583900-01	Rice	nucleus	55.85	54.64
TraesCS2B01G478700.1	Wheat	nucleus	45.7	49.88
TraesCS2A01G456600.1	Wheat	nucleus	45.25	49.04
TraesCS2D01G456900.1	Wheat	nucleus	45.03	49.04
HORVU2Hr1G104580.2	Barley	nucleus	45.03	44.16
Zm00001d015487_P001	Maize	nucleus	6.62	38.46
Zm00001d051480_P001	Maize	nucleus	30.68	35.19
Zm00001d023295_P001	Maize	nucleus	6.62	31.58
Zm00001d017642_P001	Maize	nucleus	32.01	31.05
Zm00001d034945_P001	Maize	mitochondrion, nucleus	11.26	29.82
GSMUA_Achr8P13440_001	Banana	nucleus	24.28	29.02
Zm00001d034946_P001	Maize	mitochondrion	10.15	27.38
Zm00001d034947_P001	Maize	mitochondrion	10.15	27.38
Zm00001d017609_P011	Maize	nucleus	15.67	26.01
Zm00001d014863_P002	Maize	nucleus	24.28	25.46
Solyc03g098320.2.1	Tomato	nucleus	24.72	24.45
PGSC0003DMT400065850	Potato	nucleus	24.28	23.61
GSMUA_AchrUn_...	Banana	nucleus	22.74	22.06
GSMUA_Achr11P...	Banana	nucleus	23.18	21.97
Zm00001d046974_P002	Maize	nucleus	16.34	21.96
Zm00001d045581_P002	Maize	nucleus	14.57	20.89
Zm00001d039785_P001	Maize	nucleus	12.8	20.64
Zm00001d036632_P002	Maize	nucleus	15.89	20.06
Zm00001d049543_P003	Maize	nucleus	26.93	16.94
Zm00001d024546_P001	Maize	nucleus	17.66	12.07
Zm00001d044969_P001	Maize	cytosol	1.32	6.38
Zm00001d012051_P001	Maize	plastid	1.77	5.88
Zm00001d011020_P001	Maize	extracellular	2.43	5.42
Zm00001d032105_P001	Maize	plastid	1.32	4.72

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100273483	MapMan:15.5.2.2	ProteinID:AQK45303.1	UniProt:B4FVU9	EMBL:BT041237
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF45	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00017B7FA8	EnsemblPlantsGene:Zm00001d026017	EnsemblPlants:Zm00001d026017_P001
EnsemblPlants:Zm00001d026017_T001	SEG:seg	:	:	:	:

Description

MYB-related-transcription factor 111Protein REVEILLE 1

Coordinates

chr10:-:136073204..136075724

Molecular Weight (calculated)

49010.3 Da

IEP (calculated)

8.360

GRAVY (calculated)

-0.705

Length

453 amino acids

Sequence
(BLAST)

001: MARIQPRTDQ RPAVDVDHVG HGNFTGHLKS TLSSGDMDLP GGARAPKARK PYTISKQREK WTEDEHRLFL EALRQHGRAW RRIQEHVGSK TAVQIRSHAQ
101: KFFSKVIRES SGGDSNGNGN GVAAPPQIQI PPPRPKRRPT HPYPRKLGSS VGKDDASAIK RLQEPQLQAQ SPSLSEQETC SPKSVLTTAE GSGSPASSVY
201: MMEDRCLTPS TAVALSKEAT TSDEAACELP GGPVLWLFGK RVVVSNLFDQ QPSSNTGSLQ LQRVADMELD ASAPESPTSC GTGKKLSSHA AEEAKTWHPW
301: LTGTRQFMHC LPQGEQFSVH SACRPLSYGD GSMPYTAWNA QTVTSNKQQD NQPSQAAADC EVTRAQGSWT EPSVTTSSSS VVETAQNSDS VESTKVNNDG
401: DKVAPVPGSR KCASVVPDCL RGFAPCKRTP QSKMLLQSEA PGEADREMTR LCL

Best Arabidopsis Sequence Match ( AT5G17300.1 )
(BLAST)

001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL

Arabidopsis Description

RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.