Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044969_P001 | Maize | cytosol | 41.73 | 56.38 |
| Zm00001d012051_P001 | Maize | plastid | 59.06 | 55.15 |
| Zm00001d023295_P001 | Maize | nucleus | 30.71 | 41.05 |
| Zm00001d039785_P001 | Maize | nucleus | 85.83 | 38.79 |
| Zm00001d011020_P001 | Maize | extracellular | 60.63 | 37.93 |
| OQU86282 | Sorghum | nucleus | 77.17 | 25.32 |
| Os01t0156000-01 | Rice | nucleus | 60.63 | 25.16 |
| TraesCS3D01G134000.1 | Wheat | nucleus | 55.91 | 23.83 |
| TraesCS3B01G151500.1 | Wheat | nucleus | 52.76 | 23.43 |
| TraesCS3A01G308500.1 | Wheat | nucleus | 54.33 | 23.15 |
| Zm00001d034947_P001 | Maize | mitochondrion | 25.2 | 19.05 |
| Zm00001d034946_P001 | Maize | mitochondrion | 25.2 | 19.05 |
| Zm00001d034945_P001 | Maize | mitochondrion, nucleus | 23.62 | 17.54 |
| HORVU3Hr1G025030.1 | Barley | nucleus | 55.91 | 16.55 |
| GSMUA_Achr3P17770_001 | Banana | nucleus | 29.92 | 15.9 |
| Zm00001d015487_P001 | Maize | nucleus | 8.66 | 14.1 |
| Zm00001d017609_P011 | Maize | nucleus | 26.77 | 12.45 |
| Zm00001d045581_P002 | Maize | nucleus | 27.56 | 11.08 |
| Zm00001d046974_P002 | Maize | nucleus | 29.13 | 10.98 |
| Zm00001d036632_P002 | Maize | nucleus | 27.56 | 9.75 |
| Zm00001d017642_P001 | Maize | nucleus | 9.45 | 2.57 |
| Zm00001d014863_P002 | Maize | nucleus | 7.09 | 2.08 |
| Zm00001d024546_P001 | Maize | nucleus | 9.45 | 1.81 |
| Zm00001d051480_P001 | Maize | nucleus | 5.51 | 1.77 |
| Zm00001d049543_P003 | Maize | nucleus | 7.87 | 1.39 |
| Zm00001d002545_P002 | Maize | nucleus | 4.72 | 1.36 |
| Zm00001d026017_P001 | Maize | nucleus | 4.72 | 1.32 |
| Zm00001d024547_P001 | Maize | peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d032105_P001 | EnsemblPlants:Zm00001d032105_T001 | EnsemblPlantsGene:Zm00001d032105 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF55 | ProteinID:ONM04399.1 |
| SEG:seg | UniParc:UPI0008441EE3 | UniProt:A0A1D6KNK8 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1:-:213134966..213136307
Molecular Weight (calculated)
13535.0 Da
IEP (calculated)
4.996
GRAVY (calculated)
-0.164
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPRHHFAMQ QQQQSSVAGG SSAAAMPLLH GRQPTCASVA MPGGSQFIGA PSLCDTSIDW AGGGGGSEDV SFAQVYRFVG DMFDADAPVP VEAHLQKLKE
101: MDNITTKTVL LVLRNLENNL SAPQFEP
101: MDNITTKTVL LVLRNLENNL SAPQFEP
001: MTSTNPVVAE VIPAETSTDA TETTIATTEA GEAPEKKVRK AYTITKSRES WTEGEHDKFL EALQLFDRDW KKIEDFVGSK TVIQIRSHAQ KYFLKVQKNG
101: TLAHVPPPRP KRKAAHPYPQ KASKNAQMSL HVSMSFPTQI NNLPGYTPWD DDTSALLNIA VSGVIPPEDE LDTLCGAEVD VGSNDMISET SPSASGIGSS
201: SRTLSDSKGL RLAKQAPSMH GLPDFAEVYN FIGSVFDPDS KGRMKKLKEM DPINFETVLL LMRNLTVNLS NPDFEPTRKV MNT
101: TLAHVPPPRP KRKAAHPYPQ KASKNAQMSL HVSMSFPTQI NNLPGYTPWD DDTSALLNIA VSGVIPPEDE LDTLCGAEVD VGSNDMISET SPSASGIGSS
201: SRTLSDSKGL RLAKQAPSMH GLPDFAEVYN FIGSVFDPDS KGRMKKLKEM DPINFETVLL LMRNLTVNLS NPDFEPTRKV MNT
Arabidopsis Description
RVE4LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.