Factsheet for TraesCS3D01G134000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G308500.1	Wheat	nucleus	95.97	95.97
TraesCS3B01G151500.1	Wheat	nucleus	87.92	91.61
Os01t0156000-01	Rice	nucleus	66.44	64.71
HORVU3Hr1G025030.1	Barley	nucleus	92.28	64.1
Zm00001d044969_P001	Maize	cytosol	19.8	62.77
Zm00001d015487_P001	Maize	nucleus	16.11	61.54
Zm00001d039785_P001	Maize	nucleus	57.38	60.85
Zm00001d023295_P001	Maize	nucleus	18.79	58.95
Zm00001d012051_P001	Maize	plastid	26.17	57.35
Zm00001d032105_P001	Maize	plastid	23.83	55.91
OQU86282	Sorghum	nucleus	62.42	48.06
TraesCS1D01G111400.1	Wheat	mitochondrion	34.23	46.15
Zm00001d011020_P001	Maize	extracellular	30.54	44.83
GSMUA_Achr3P17770_001	Banana	nucleus	29.19	36.4
TraesCS6D01G239800.1	Wheat	nucleus	33.22	34.62
TraesCS7D01G014900.2	Wheat	nucleus	32.21	33.92
TraesCS7D01G458000.1	Wheat	nucleus	31.88	27.86
TraesCS6D01G241900.1	Wheat	nucleus	22.15	14.7
TraesCS2D01G456900.1	Wheat	nucleus	19.13	13.7
TraesCS7D01G540700.3	Wheat	nucleus	21.81	13.46
TraesCS7D01G295400.1	Wheat	nucleus	22.15	8.84

Protein Annotations

EnsemblPlants:TraesCS3D01G134000.1	EnsemblPlantsGene:TraesCS3D01G134000	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	MapMan:27.1.6.2	:

Description

No Description!

Coordinates

chr3D:+:93196344..93198003

Molecular Weight (calculated)

32343.1 Da

IEP (calculated)

7.721

GRAVY (calculated)

-0.550

Length

298 amino acids

Sequence
(BLAST)

001: MAERGGSGEG TSSSPGKKAR KPYTITRPRE RWCPDEHERF LDALLRFGRD WRKIEEHVRT KTAVQIRSHA QKYFLKVQRL GLAAGLPPPQ HPSRRLAMSQ
101: QQISPADGTA VLHGQPQHCP TGVVQGPVGW TYPGPGVLPA SNDMQNSDWA GSSGTSAWVS HGGAGSQTEP AAATHPGGSS FMGAPSFDDT SMDWTGSGST
201: GEASAIADAE DETIPLPLSP DDMHFARVYR FIGDIFDPAT PCRIEAHLQK LKDMDGITVK TILLVLRNLE TNLTAPQFEP IRRLLSRYDP GRGLSGQL

Best Arabidopsis Sequence Match ( AT4G01280.1 )
(BLAST)

001: MVSVNPRPKG FPVFDSSNMS LPSSDGFGSI PATGRTSTVS FSEDPTTKIR KPYTIKKSRE NWTDQEHDKF LEALHLFDRD WKKIEAFVGS KTVVQIRSHA
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EEEPGVSATA
201: PLPNNRCRQE DTERVRAVTK PNNEESCEKP HRVMPNFAEV YSFIGSVFDP NTSGHLQRLK QMDPINMETV LLLMQNLSVN LTSPEFAEQR RLISSYSAKA
301: LK

Arabidopsis Description

RVE5Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.