Factsheet for TraesCS7D01G458000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G470700.1	Wheat	nucleus	96.48	96.76
TraesCS7B01G372500.1	Wheat	nucleus	95.89	95.89
HORVU7Hr1G107550.3	Barley	nucleus	92.08	74.23
TraesCS7D01G014900.2	Wheat	nucleus	53.67	64.66
TraesCS6D01G239800.1	Wheat	nucleus	48.09	57.34
KRH08856	Soybean	nucleus	49.85	56.48
GSMUA_Achr7P17560_001	Banana	nucleus	49.27	56.0
Solyc06g036300.2.1	Tomato	nucleus, plastid	48.39	54.82
KRH35235	Soybean	nucleus	48.39	52.88
PGSC0003DMT400074344	Potato	plastid	43.99	51.9
KRG91589	Soybean	nucleus	48.97	50.76
VIT_16s0050g01180.t01	Wine grape	nucleus	50.15	50.74
CDY52837	Canola	nucleus	44.87	50.0
Bra029111.1-P	Field mustard	nucleus	46.92	50.0
Bra003117.1-P	Field mustard	nucleus	44.87	50.0
CDY56155	Canola	nucleus	46.92	49.54
AT5G52660.2	Thale cress	nucleus	46.92	48.34
KRH38371	Soybean	nucleus	49.27	47.59
CDY27841	Canola	nucleus	39.3	46.85
CDY51831	Canola	vacuole	46.92	45.98
TraesCS1D01G111400.1	Wheat	mitochondrion	23.46	36.2
TraesCS3D01G134000.1	Wheat	nucleus	27.86	31.88
TraesCS2D01G456900.1	Wheat	nucleus	21.7	17.79
TraesCS6D01G241900.1	Wheat	nucleus	21.11	16.04
TraesCS7D01G540700.3	Wheat	nucleus	21.41	15.11
TraesCS7D01G295400.1	Wheat	nucleus	22.58	10.31

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7D01G458000	EnsemblPlants:TraesCS7D01G458000.1	TIGR:cd00167	SEG:seg	:

Description

No Description!

Coordinates

chr7D:-:575945655..575955076

Molecular Weight (calculated)

36383.9 Da

IEP (calculated)

5.922

GRAVY (calculated)

-0.495

Length

341 amino acids

Sequence
(BLAST)

001: MVSMSTTPKP LEAGAAAAAV GGGGGDGGGG GGGKGKEQQQ VVPVAAGPPM AVPADAAAAA EDARMKVRKP YTITKSRESW TEPEHDKFLE ALQLFDRDWK
101: KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT GEHLPPPRPK RKAAHPYPQK ASKTAPVAPQ AVLSQQPAPP PPPPREQDGV DVSMDASMVV PNTNANAVVP
201: SWDNALVQPT QVTSAIATNN CSSSIESQSG TWPTSEAVEQ ENVLPQMRAM PDFSQVYNFL GSVFDPDTTG HLQRLKAMDP IDVETVLLLM RNLSVNLINP
301: EFEAHRQLLS SYGSGGDENK PEGMENFGSQ SSHLPSMVTS E

Best Arabidopsis Sequence Match ( AT1G01520.1 )
(BLAST)

001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS

Arabidopsis Description

ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.