Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G017600.1 | Wheat | nucleus | 92.58 | 94.24 |
| HORVU7Hr1G001830.3 | Barley | nucleus | 89.4 | 93.36 |
| Os06t0105800-02 | Rice | nucleus | 66.43 | 63.09 |
| EER89043 | Sorghum | nucleus | 66.78 | 59.62 |
| TraesCS7D01G458000.1 | Wheat | nucleus | 64.66 | 53.67 |
| Zm00001d045581_P002 | Maize | nucleus | 58.3 | 52.22 |
| GSMUA_Achr7P17560_001 | Banana | nucleus | 53.36 | 50.33 |
| TraesCS6D01G239800.1 | Wheat | nucleus | 50.53 | 50.0 |
| Solyc06g036300.2.1 | Tomato | nucleus, plastid | 50.88 | 47.84 |
| KRH08856 | Soybean | nucleus | 49.47 | 46.51 |
| KRH35235 | Soybean | nucleus | 50.18 | 45.51 |
| PGSC0003DMT400074344 | Potato | plastid | 46.29 | 45.33 |
| CDY52837 | Canola | nucleus | 47.7 | 44.12 |
| Bra003117.1-P | Field mustard | nucleus | 47.7 | 44.12 |
| Bra029111.1-P | Field mustard | nucleus | 49.82 | 44.06 |
| CDY56155 | Canola | nucleus | 49.82 | 43.65 |
| KRG91589 | Soybean | nucleus | 50.18 | 43.16 |
| VIT_16s0050g01180.t01 | Wine grape | nucleus | 51.24 | 43.03 |
| AT5G52660.2 | Thale cress | nucleus | 49.82 | 42.6 |
| CDY27841 | Canola | nucleus | 42.05 | 41.61 |
| CDY51831 | Canola | vacuole | 49.82 | 40.52 |
| KRH38371 | Soybean | nucleus | 48.76 | 39.09 |
| TraesCS1D01G111400.1 | Wheat | mitochondrion | 27.56 | 35.29 |
| TraesCS3D01G134000.1 | Wheat | nucleus | 33.92 | 32.21 |
| TraesCS2D01G456900.1 | Wheat | nucleus | 25.8 | 17.55 |
| TraesCS6D01G241900.1 | Wheat | nucleus | 26.15 | 16.48 |
| TraesCS7D01G540700.3 | Wheat | nucleus | 24.38 | 14.29 |
| TraesCS7D01G295400.1 | Wheat | nucleus | 27.92 | 10.58 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G014900.2 | EnsemblPlantsGene:TraesCS7D01G014900 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | InterPro:SANT/Myb |
| PANTHER:PTHR12802 | PANTHER:PTHR12802:SF85 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:cd00167 | TIGRFAMs:TIGR01557 | MapMan:15.5.2.2 | MapMan:27.1.6.2 | : |
Description
No Description!
Coordinates
chr7D:+:6478624..6482767
Molecular Weight (calculated)
31000.4 Da
IEP (calculated)
5.751
GRAVY (calculated)
-0.586
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVMESAAM AGGGGEGEGA EGAGRVRKPY TITKSRESWT DPEHDKFIEA LLLFDRDWRK IEAFVGSKTV IQIRSHAQKY FLKVQKNGTG EHLPPPRPKR
101: KAAHPYPHNK ASKKAPEADL PQQPPHIVEQ GCAIPMDAPT VATNSSANDT FPSWDDVLTQ PYSPRHTQDL GAANNSSSSI ECQSGTWATS DAIEQETWPT
201: SDAIEQEIIL PALHAMPDFA QVYNFLGGVF DPDTTGHLQK LREMDPIDAE TVLQLMKNLS VNLSGPDFET HRRMLSSHGG GMC
101: KAAHPYPHNK ASKKAPEADL PQQPPHIVEQ GCAIPMDAPT VATNSSANDT FPSWDDVLTQ PYSPRHTQDL GAANNSSSSI ECQSGTWATS DAIEQETWPT
201: SDAIEQEIIL PALHAMPDFA QVYNFLGGVF DPDTTGHLQK LREMDPIDAE TVLQLMKNLS VNLSGPDFET HRRMLSSHGG GMC
001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA
Arabidopsis Description
RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.