Factsheet for TraesCS7B01G372500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G470700.1	Wheat	nucleus	97.65	97.94
TraesCS7D01G458000.1	Wheat	nucleus	95.89	95.89
Os06t0669700-01	Rice	nucleus	54.84	75.71
KXG20579	Sorghum	nucleus	73.9	74.34
HORVU7Hr1G107550.3	Barley	nucleus	91.5	73.76
Zm00001d046974_P002	Maize	nucleus	68.33	69.14
Os06t0105800-02	Rice	nucleus	58.65	67.11
Zm00001d036632_P002	Maize	nucleus	66.28	62.95
EER89043	Sorghum	nucleus	57.77	62.15
TraesCS6B01G266800.3	Wheat	nucleus	47.51	56.64
GSMUA_Achr7P17560_001	Banana	nucleus	49.56	56.33
KRH08856	Soybean	nucleus	49.56	56.15
Solyc06g036300.2.1	Tomato	nucleus, plastid	48.09	54.49
KRH35235	Soybean	nucleus	48.09	52.56
Zm00001d045581_P002	Maize	nucleus	48.68	52.53
PGSC0003DMT400074344	Potato	plastid	43.7	51.56
KRG91589	Soybean	nucleus	48.68	50.46
VIT_16s0050g01180.t01	Wine grape	nucleus	49.85	50.45
Bra029111.1-P	Field mustard	nucleus	47.21	50.31
CDY52837	Canola	nucleus	44.87	50.0
Bra003117.1-P	Field mustard	nucleus	44.87	50.0
CDY56155	Canola	nucleus	47.21	49.85
AT5G52660.2	Thale cress	nucleus	46.92	48.34
KRH38371	Soybean	nucleus	48.97	47.31
CDY27841	Canola	nucleus	39.3	46.85
CDY51831	Canola	vacuole	47.21	46.26
TraesCS1B01G129800.1	Wheat	mitochondrion	23.17	35.75
TraesCS3B01G151500.1	Wheat	nucleus	26.98	32.17
TraesCS2B01G478700.1	Wheat	nucleus	21.7	17.83
TraesCS6B01G288500.1	Wheat	nucleus	21.11	16.07
TraesCS7B01G478200.1	Wheat	nucleus	21.99	15.53
TraesCS7B01G188000.1	Wheat	nucleus	22.58	10.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7B01G372500	EnsemblPlants:TraesCS7B01G372500.1	TIGR:cd00167	SEG:seg	:

Description

No Description!

Coordinates

chr7B:-:638129949..638134271

Molecular Weight (calculated)

36406.0 Da

IEP (calculated)

6.408

GRAVY (calculated)

-0.510

Length

341 amino acids

Sequence
(BLAST)

001: MVSMSTAPKP LEAAAAAVGG GGGDGGGGGG GKGGKGKEQQ QQVAVAAGPP MAVPADAAAA EDARMKVRKP YTITKSRESW TEPEHDKFLE ALQLFDRDWK
101: KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT GEHLPPPRPK RKAAHPYPQK ASKTAPVASQ AVLSQQPAPP PPPPRDQDSV NVSMDASMVV PSTNANAVVP
201: SWDNALVQPT QVTSAIATNN CSSSIESQSG MWPTSEAVEQ ENVLPQMRAM PDFSQVYNFL GSVFDPDTTG HLQRLKAMDP IDVETVLLLM RNLSMNLINP
301: EFEAHRQLLS SYGSGGDENK PEGMENLGSQ SSHLPSMVTS E

Best Arabidopsis Sequence Match ( AT1G01520.1 )
(BLAST)

001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS

Arabidopsis Description

ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.