Factsheet for TraesCS6B01G288500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G241900.1	Wheat	nucleus	97.32	97.1
TraesCS6A01G261100.1	Wheat	nucleus	95.76	90.7
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	90.85	75.23
Os02t0685200-01	Rice	nucleus	65.4	59.67
EES05718	Sorghum	nucleus	58.04	57.14
Zm00001d051480_P001	Maize	nucleus	48.21	54.68
Zm00001d017642_P001	Maize	nucleus	54.24	52.03
TraesCS2B01G478700.1	Wheat	nucleus	35.27	38.07
GSMUA_Achr8P13440_001	Banana	nucleus	30.36	35.88
Solyc03g098320.2.1	Tomato	nucleus	29.24	28.6
PGSC0003DMT400065850	Potato	nucleus	28.79	27.68
TraesCS7B01G478200.1	Wheat	nucleus	29.46	27.33
TraesCS6B01G266800.3	Wheat	nucleus	17.19	26.92
GSMUA_AchrUn_...	Banana	nucleus	26.34	25.27
TraesCS1B01G129800.1	Wheat	mitochondrion	12.28	24.89
GSMUA_Achr11P...	Banana	nucleus	26.12	24.48
TraesCS3B01G151500.1	Wheat	nucleus	13.84	21.68
TraesCS7B01G372500.1	Wheat	nucleus	16.07	21.11
TraesCS7B01G188000.1	Wheat	nucleus	27.9	16.89

Protein Annotations

EnsemblPlants:TraesCS6B01G288500.1	EnsemblPlantsGene:TraesCS6B01G288500	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	:	:

Description

No Description!

Coordinates

chr6B:-:519404159..519406681

Molecular Weight (calculated)

48083.4 Da

IEP (calculated)

8.995

GRAVY (calculated)

-0.847

Length

448 amino acids

Sequence
(BLAST)

001: MACTQENAMA TDESTADHRR SRPSSHDMDL SGDDHVPKAR KPYTITKQRE KWTEEEHKRF LEALQLHGRA WRRIQEHIGT KTAVQIRSHA QKFFSKVTRE
101: SSGSSSGSGA AAATATAAIQ IPPPRPKRKP THPYPRKADD GAAAGGKHAP GLTHLERPPV RMGEQEEGSP TSVLTASRVE ASGGRFSNNS SGSRSPVPSA
201: AGSLYGSSVD RGDGCLSPNT KTSEITANGN VKEGSCTGSA TSVLKLFGKK VVVNDSFQKP NTSTGNPQNG ADVGTEASDD TTTQGSRNLP SGGATEGSSW
301: NPWPSNMQQF VYFVPQPDGF ATQSAVPWFG TLPGAMFYQQ AVAPNQHQRH RSETADHKFM QREGSWTGSN TGPGSAAHNS DAADSRGRGN ISESDKTLVP
401: RLTKCESSVS ISLQRGFMPY KRCAAESESL RSEAPREETD GELTRLCL

Best Arabidopsis Sequence Match ( AT5G17300.1 )
(BLAST)

001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL

Arabidopsis Description

RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.