Factsheet for HORVU3Hr1G025030.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G308500.1	Wheat	nucleus	64.34	92.62
TraesCS3D01G134000.1	Wheat	nucleus	64.1	92.28
TraesCS3B01G151500.1	Wheat	nucleus	59.91	89.86
Os01t0156000-01	Rice	nucleus	46.62	65.36
Zm00001d015487_P001	Maize	nucleus	11.42	62.82
Zm00001d044969_P001	Maize	cytosol	13.52	61.7
Zm00001d039785_P001	Maize	nucleus	40.09	61.21
Zm00001d023295_P001	Maize	nucleus	13.29	60.0
Zm00001d032105_P001	Maize	plastid	16.55	55.91
Zm00001d012051_P001	Maize	plastid	17.72	55.88
OQU86282	Sorghum	nucleus	46.62	51.68
Zm00001d011020_P001	Maize	extracellular	20.51	43.35
GSMUA_Achr3P17770_001	Banana	nucleus	20.05	35.98
HORVU6Hr1G066000.1	Barley	nucleus	23.08	34.98
HORVU7Hr1G001830.3	Barley	nucleus	20.75	32.84
HORVU0Hr1G031850.1	Barley	nucleus, plastid	23.78	30.63
HORVU7Hr1G107550.3	Barley	nucleus	23.54	23.88
HORVU7Hr1G121210.4	Barley	nucleus	15.85	13.85
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	17.25	13.68
HORVU2Hr1G104580.2	Barley	nucleus	14.45	13.42
HORVU7Hr1G070870.2	Barley	nucleus	15.85	9.48

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	UniProt:A0A287KGP0	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU3Hr1G025030	EnsemblPlants:HORVU3Hr1G025030.1	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B487A37	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:98886505..98888997

Molecular Weight (calculated)

45764.4 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.398

Length

429 amino acids

Sequence
(BLAST)

001: ARARSLFLPA TQPHTAEEAH VAVRFAPTRS GCLGLAPAAS LAASMQAPTV RADPSPRLAG LIPLPPHAAA AGPCKKPRGQ MGSRGAACVY IYVRGCRASL
101: GIESDERLAS AREDRPSLLA CLLAGSWSIM AERGGGGEGE GTSSSPGKKA RKPYTITRPR ERWSPEEHER FLDALLRFGR DWKKIEEHVR TKTAVQIRSH
201: AQKYFLKVQR LGLAAGLPPP QHPSRRHAMS QQQISPADGT AVLHGQPQHC PPGAVQGTIG WSYPGPGALP APNDMQNLDW AGSSGSSAWV SHGGAGSHTE
301: QAAATHPGGS SFMGPPSFDD TSMDWTGTGS TGEASAIADA EDETIPLPLS PGDMHFAQVY RFIGDIFDPA TPCRIEAHLQ KLKDMDGITV KTILLVLRNL
401: ETNLAAPQFE PIRRLLSRYD PGRGLPGHL

Best Arabidopsis Sequence Match ( AT3G09600.1 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.