Factsheet for TraesCS2A01G456600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G478700.1	Wheat	nucleus	95.69	96.39
TraesCS2D01G456900.1	Wheat	nucleus	95.45	95.91
HORVU2Hr1G104580.2	Barley	nucleus	88.76	80.3
Os04t0583900-01	Rice	nucleus	62.2	56.16
EES12724	Sorghum	nucleus	52.63	49.66
Zm00001d002545_P002	Maize	nucleus	51.67	49.09
Zm00001d026017_P001	Maize	nucleus	49.04	45.25
TraesCS6A01G261100.1	Wheat	nucleus	36.84	32.56
GSMUA_Achr8P13440_001	Banana	nucleus	29.43	32.45
TraesCS7A01G017600.1	Wheat	nucleus	17.94	26.98
Solyc03g098320.2.1	Tomato	nucleus	27.27	24.89
TraesCS4A01G474100.2	Wheat	nucleus	18.18	24.6
TraesCS7A01G553800.1	Wheat	nucleus	29.43	24.16
PGSC0003DMT400065850	Potato	nucleus	26.32	23.61
GSMUA_Achr11P...	Banana	nucleus	25.84	22.59
GSMUA_AchrUn_...	Banana	nucleus	25.12	22.48
TraesCS7A01G470700.1	Wheat	nucleus	17.94	22.06
TraesCS6A01G258600.2	Wheat	nucleus	17.46	21.34
TraesCS1A01G107700.1	Wheat	mitochondrion	10.77	20.55
TraesCS3A01G308500.1	Wheat	nucleus	14.59	20.47
TraesCS7A01G299400.3	Wheat	nucleus	27.99	15.68

Protein Annotations

EnsemblPlants:TraesCS2A01G456600.1	EnsemblPlantsGene:TraesCS2A01G456600	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF45	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	:	:

Description

No Description!

Coordinates

chr2A:+:705499491..705501276

Molecular Weight (calculated)

45236.7 Da

IEP (calculated)

7.548

GRAVY (calculated)

-0.723

Length

418 amino acids

Sequence
(BLAST)

001: MARFQETKPD LLNSGSDTRM MAEARAPKAR KPYMITKQRE KWTEEEHKLF LEAMQLHGRA WRRIQEHIGT KTAVQIRSHA QKFFSKVTRD SSGDSGGSSS
101: GGAGPPIQIP PPRPKRKSVH PYPCNQRSAQ PGKHAHAALL RVDKPQLSMC EQGNGSPTSV VTTSQIGLGG SESFDSDTST IDVEERCPTP STGTAEVAVL
201: APPTNDSKKS KGSSGTSEEV VCDNTSDAPV LKLFGKTVVV NESHQLPNPG TCNLQTAADM ELDTSAETPT SAPEANTWSP WLANSQQFMY YVPQGAVFFG
301: YNNGSVPYPV SSSPKADQQH QQHASEAAAE LRRREASSNT ASSSVAETTA RNSAESCTGA VGGDDEMVHA AGLRERVSPA FVQQRGFMPY KRCAAESKAM
401: QPQAPREEAD REMTRLCL

Best Arabidopsis Sequence Match ( AT1G18330.1 )
(BLAST)

001: MAAEDRSEEL SSNVENGSCN SNEGINPETS SHWIENVVKV RKPYTVTKQR EKWSEEEHDR FLEAIKLYGR GWRQIQEHIG TKTAVQIRSH AQKFFSKMAQ
101: EADSRSEGSV KAIVIPPPRP KRKPAHPYPR KSPVPYTQSP PPNLSAMEKG TKSPTSVLSS FGSEDQVNRC SSPNSCTSDI QSIGATSIDK KNNYTTSKQP
201: FKDDSDIGST PISSITLFGK IVLVAEESHK PSSYNDDDLK QMTCQENHYS GMLVDTNLSL GVWETFCTGS NAFGSVTEAS ENLEKSAEPI SSSWKRLSSL
301: EKQGSCNPVN ASGFRPYKRC LSEREVTSSL TLVASDEKKS QRARIC

Arabidopsis Description

RVE7Protein REVEILLE 7 [Source:UniProtKB/Swiss-Prot;Acc:B3H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.