Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P04620_001 | Banana | nucleus | 40.16 | 18.35 |
| GSMUA_Achr5P10280_001 | Banana | nucleus | 37.7 | 16.91 |
| CDY27841 | Canola | nucleus | 35.25 | 15.04 |
| GSMUA_Achr7P17560_001 | Banana | nucleus | 36.89 | 15.0 |
| Bra003117.1-P | Field mustard | nucleus | 36.07 | 14.38 |
| CDY52837 | Canola | nucleus | 36.07 | 14.38 |
| Bra029111.1-P | Field mustard | nucleus | 36.89 | 14.06 |
| Solyc06g036300.2.1 | Tomato | nucleus, plastid | 34.43 | 13.95 |
| KRH08856 | Soybean | nucleus | 34.43 | 13.95 |
| CDY56155 | Canola | nucleus | 36.89 | 13.93 |
| PGSC0003DMT400074344 | Potato | plastid | 32.79 | 13.84 |
| KRH35235 | Soybean | nucleus | 35.25 | 13.78 |
| GSMUA_Achr3P17770_001 | Banana | nucleus | 26.23 | 13.39 |
| KRG91589 | Soybean | nucleus | 36.07 | 13.37 |
| VIT_16s0050g01180.t01 | Wine grape | nucleus | 36.89 | 13.35 |
| AT5G52660.2 | Thale cress | nucleus | 35.25 | 12.99 |
| CDY51831 | Canola | vacuole | 36.89 | 12.93 |
| GSMUA_Achr1P03720_001 | Banana | nucleus | 32.79 | 11.63 |
| GSMUA_Achr1P06480_001 | Banana | plastid | 40.16 | 11.4 |
| KRH38371 | Soybean | nucleus | 32.79 | 11.33 |
| GSMUA_Achr10P... | Banana | nucleus | 4.92 | 7.14 |
| GSMUA_Achr8P13440_001 | Banana | nucleus | 17.21 | 5.54 |
| GSMUA_Achr11P... | Banana | nucleus | 14.75 | 3.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.11 | 3.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.11 | 2.66 |
| GSMUA_Achr1P06360_001 | Banana | nucleus | 14.75 | 2.48 |
| GSMUA_Achr10P... | Banana | nucleus | 11.48 | 2.32 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P15370_001 | EnsemblPlants:GSMUA_Achr1T15370_001 | EnsemblPlantsGene:GSMUA_Achr1G15370_001 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF83 | UniParc:UPI000295AEE5 |
| UniProt:M0S045 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G15370_001]
Coordinates
chr1:-:11560947..11561732
Molecular Weight (calculated)
14127.0 Da
IEP (calculated)
8.706
GRAVY (calculated)
-0.352
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMYHHLDPS RKQLIHILRK LLKMICQNKN LLVSSAHFEP TSSMHRDPAT MAVFLLGSEF YRACYFISFD KRSDRNQVTS LHVMPDFAQV YSFLGSVFDP
101: NTSGHRQKLK ATDPIDDETV SY
101: NTSGHRQKLK ATDPIDDETV SY
001: MVSVNPRPKG FPVFDSSNMS LPSSDGFGSI PATGRTSTVS FSEDPTTKIR KPYTIKKSRE NWTDQEHDKF LEALHLFDRD WKKIEAFVGS KTVVQIRSHA
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EEEPGVSATA
201: PLPNNRCRQE DTERVRAVTK PNNEESCEKP HRVMPNFAEV YSFIGSVFDP NTSGHLQRLK QMDPINMETV LLLMQNLSVN LTSPEFAEQR RLISSYSAKA
301: LK
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EEEPGVSATA
201: PLPNNRCRQE DTERVRAVTK PNNEESCEKP HRVMPNFAEV YSFIGSVFDP NTSGHLQRLK QMDPINMETV LLLMQNLSVN LTSPEFAEQR RLISSYSAKA
301: LK
Arabidopsis Description
RVE5Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.