CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014863_P002	Maize	nucleus	81.57	81.94
Os06t0728700-01	Rice	nucleus	65.67	63.19
TraesCS7B01G478200.1	Wheat	nucleus	61.52	55.28
HORVU7Hr1G121210.4	Barley	nucleus	62.44	55.19
TraesCS7D01G540700.3	Wheat	nucleus	60.83	54.66
TraesCS7A01G553800.1	Wheat	nucleus	60.83	51.87
CDY26169	Canola	nucleus	23.5	32.48
Bra025914.1-P	Field mustard	nucleus	24.42	31.74
AT3G10113.1	Thale cress	nucleus	24.42	31.55
AT1G18330.2	Thale cress	nucleus	26.04	30.38
CDY19206	Canola	nucleus	25.12	30.11
EES05718	Sorghum	nucleus	29.72	28.35
KXG31009	Sorghum	nucleus	17.74	27.4
KRH38938	Soybean	nucleus	29.26	27.25
KRH09476	Soybean	nucleus	29.26	26.62
EES12724	Sorghum	nucleus	26.96	26.41
OQU91224	Sorghum	mitochondrion, nucleus	10.6	24.34
EER89043	Sorghum	nucleus	17.28	23.66
KXG20579	Sorghum	nucleus	17.05	21.83
OQU86282	Sorghum	nucleus	14.52	16.28
EES13385	Sorghum	nucleus	27.19	15.8

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	UniProt:A0A194YLX8	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR017930	EnsemblPlants:KXG20957	ProteinID:KXG20957	ProteinID:KXG20957.1	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF86	InterPro:SANT/Myb
SMART:SM00717	EnsemblPlantsGene:SORBI_3010G275700	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000220730A	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:60871874..60877556

Molecular Weight (calculated)

46810.5 Da

IEP (calculated)

6.443

GRAVY (calculated)

-0.685

Length

434 amino acids

Sequence
(BLAST)

001: MASMAQVQER GGLPIDKRLP PDAVQSPLVD DAMQPKEGTD GYPVKARKPY TITKQREKWT EEEHGKFLEA LKLYGRSWRQ IQEHIGTKTA VQIRSHAQKF
101: FSKVVREPGA SNAIEIPPPR PKRKPLHPYP RKCADSTIAN RPIGEPKNAP ISSSSGSDQE NGSPVSVLSA MQSDAFGSSV SNPSTGCTSP ASSDEGDNVA
201: EVVNGEETIP TQQIEDDQCR QELKQDNSDG ELSEEDSSRV QETSLKLFGK TVIIPDPKKV CSSDGAAGAG EKDSHSSTQE MLQASLVGGV AAVGGVAAYP
301: SHNGWILPFQ SFPVHMYESG DARISPLHIW WPYYGFPANH PRGFGTGLHN EGASESDTSK SPSVESSSDC VGNAHTTTPT NCKVVKESLG PVESGPSVEL
401: KPSVNSAFVR VKPSSGSRDQ PIRGFMPYKR CKVE

Best Arabidopsis Sequence Match ( AT5G37260.1 )
(BLAST)

001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW

Arabidopsis Description

RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.