Factsheet for Bra034074.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41299	Canola	nucleus	95.44	88.38
AT3G09600.7	Thale cress	nucleus	84.79	74.83
Bra029778.1-P	Field mustard	nucleus	81.75	70.72
Bra005751.1-P	Field mustard	nucleus	63.88	59.36
KRH32383	Soybean	plastid	65.78	58.84
KRH19794	Soybean	nucleus	66.54	58.14
PGSC0003DMT400028711	Potato	nucleus	62.74	57.69
Bra009562.1-P	Field mustard	nucleus	68.06	57.37
VIT_08s0040g03220.t01	Wine grape	nucleus	61.22	56.89
Solyc10g084370.1.1	Tomato	nucleus	63.88	56.76
KRH67632	Soybean	nucleus	61.98	54.52
KRG95914	Soybean	nucleus	59.7	54.33
Bra033257.1-P	Field mustard	plastid	50.19	48.89
Bra003117.1-P	Field mustard	nucleus	50.57	43.46
Bra029111.1-P	Field mustard	nucleus	52.09	42.81
Bra037365.1-P	Field mustard	nucleus	47.53	36.87
Bra039503.1-P	Field mustard	nucleus	24.71	19.52
Bra008563.1-P	Field mustard	nucleus	25.86	19.15
Bra024430.1-P	Field mustard	mitochondrion, nucleus	15.21	18.69
Bra023610.1-P	Field mustard	nucleus	26.24	18.6
Bra006394.1-P	Field mustard	nucleus	25.48	18.41
Bra025914.1-P	Field mustard	nucleus	20.91	16.47
Bra004503.1-P	Field mustard	nucleus	24.33	11.59
Bra033291.1-P	Field mustard	nucleus	25.86	11.2
Bra030496.1-P	Field mustard	nucleus	23.95	10.75
Bra004502.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EnsemblPlantsGene:Bra034074	EnsemblPlants:Bra034074.1	EnsemblPlants:Bra034074.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EZ31
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF81
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000254438C	SEG:seg

Description

AT3G09600 (E=6e-050) | myb family transcription factor

Coordinates

chrA01:-:27570726..27572379

Molecular Weight (calculated)

29482.1 Da

IEP (calculated)

10.170

GRAVY (calculated)

-0.475

Length

263 amino acids

Sequence
(BLAST)

001: MSSSTSRNQT AAEAQPSTDV VAEGSSKKVR KPYTITKSRE SWTEEEHDKF LEALQLFDRD WKKIEDFVGS KTVIQIRSHA QKYFLKVQKN GTLAHVPPPR
101: PKRKAAHPYP QKASKSAQMQ LQVSTSWDDA SMLLNRVISP RQELATFRGP QGTLFTDIGP KGILNVSSPS TSGLGSSSRT FSGSEIVAKQ PPVLHVVPDF
201: SEVYNFIGSV FDPETRLDHV AKLKEMDPIN FETVLLLMRN LTFNLSNPEF ESAVSVKFRM IRL

Best Arabidopsis Sequence Match ( AT3G09600.4 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.