Factsheet for Solyc10g084370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028711	Potato	nucleus	93.58	96.85
VIT_08s0040g03220.t01	Wine grape	nucleus	69.59	72.79
KRH32383	Soybean	plastid	70.27	70.75
KRG95914	Soybean	nucleus	66.89	68.51
KRH67632	Soybean	nucleus	66.55	65.89
KRH19794	Soybean	nucleus	65.54	64.45
Bra034074.1-P	Field mustard	nucleus	56.76	63.88
AT3G09600.7	Thale cress	nucleus	62.84	62.42
CDY41299	Canola	nucleus	58.45	60.92
CDY11228	Canola	nucleus	56.08	60.14
CDY44719	Canola	nucleus	61.49	59.87
CDY41598	Canola	nucleus	60.81	59.8
CDX70341	Canola	nucleus	57.43	59.65
Bra029778.1-P	Field mustard	nucleus	61.15	59.54
CDX80840	Canola	nucleus	54.05	59.26
AT5G02840.1	Thale cress	nucleus	58.45	59.04
Bra005751.1-P	Field mustard	nucleus	55.41	57.95
Bra009562.1-P	Field mustard	nucleus	58.45	55.45
Solyc06g036300.2.1	Tomato	nucleus, plastid	48.99	48.17
Solyc01g095030.2.1	Tomato	nucleus	48.31	43.2
CDY10419	Canola	nucleus	57.09	31.65
Solyc02g036370.2.1	Tomato	nucleus	26.35	16.81
Solyc03g098320.2.1	Tomato	nucleus	25.0	16.16
Solyc10g005080.2.1	Tomato	nucleus	25.68	9.97

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K4D3M3	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF81	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
EnsemblPlantsGene:Solyc10g084370.1	EnsemblPlants:Solyc10g084370.1.1	TIGRFAMs:TIGR01557	UniParc:UPI000276A26A	SEG:seg	:

Description

No Description!

Coordinates

chr10:-:63940049..63944248

Molecular Weight (calculated)

32703.7 Da

IEP (calculated)

8.751

GRAVY (calculated)

-0.600

Length

296 amino acids

Sequence
(BLAST)

001: MNSSSENCTS MANNSTPTDA SSKKVRKPYT ITKSRESWTE EEHDKFLEAL QLFDRDWKKI EDFVGSKTVI QIRSHAQKYF LKVQKNGSIA HVPPPRPKRK
101: AAHPYPQKAP KNVLVPLQAS MGYPSSMNSL PPGYPTWDDA SVLINSPSGG VMPSQDEYHL QRIQADNGSK GATLISNCSM SGIRSSNRTA PSSELPDQNK
201: LGSVPHGIPD FAEVYSFIGS VFDPDTRGHV QKLKEMDPIN FETVLMLMRN LTMNLSSPDF EPIKNVLSTY DLSSKVVGLP TGGSVNNRND LSCQTI

Best Arabidopsis Sequence Match ( AT3G09600.7 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.