Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G496400.1 | Wheat | mitochondrion | 72.78 | 71.43 |
| TraesCS2A01G496300.1 | Wheat | mitochondrion | 75.32 | 54.84 |
| TraesCS6A01G168400.1 | Wheat | cytosol | 58.86 | 43.26 |
| TraesCS3A01G497600.1 | Wheat | extracellular | 32.91 | 24.19 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 36.08 | 23.55 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 30.38 | 22.43 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 31.65 | 21.83 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 33.54 | 21.54 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 32.28 | 20.0 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 34.18 | 20.0 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 29.75 | 19.83 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 30.38 | 19.75 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 34.18 | 19.64 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 24.68 | 19.21 |
| KXG29686 | Sorghum | cytosol | 22.15 | 18.32 |
| TraesCS1A01G068200.1 | Wheat | nucleus | 28.48 | 18.22 |
| Zm00001d015868_P001 | Maize | nucleus | 24.05 | 17.67 |
| EES04679 | Sorghum | cytosol | 20.89 | 17.19 |
| OQU84555 | Sorghum | cytosol | 12.66 | 15.15 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G496500.1 | EnsemblPlantsGene:TraesCS2A01G496500 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF31 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:727443846..727444875
Molecular Weight (calculated)
18059.6 Da
IEP (calculated)
6.979
GRAVY (calculated)
-0.384
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLSSHRDHH VLQIRRSSRY GEVIRVAQLD EVADMSLVQP YVVNHERVVY LNPRSQAPQH AVKCFRPAGE CLVCDRKLVE PIFHFCSISC KLHAMVSDPN
101: LTFILDPECK WEYTNLHEEE EEGGDVPGPS NFLLIGGTSY HRQPRKSVCG PPQRAPFY
101: LTFILDPECK WEYTNLHEEE EEGGDVPGPS NFLLIGGTSY HRQPRKSVCG PPQRAPFY
001: MGPMMMRAEE DNYNLNPPPW LIPMLRANYF IPCSIHAASN KSECNMFCLD CSSEAFCSYC LLNHRNHRVL QIRRSSYHNV VRVNEIQKYI DISCVQTYII
101: NSARIVFLNE RPQPRIGKGV TNTCEICCRS LLDSFRFCSL GCKLGGMKRD PSLTFSLRGK HGREYEGEWE SDEATTPTKI RKTCAFNRLM SGLSISTVKC
201: DYLSGDQPSS SSGDESGFKL SPGTPPIYNH RNSSRRKGVP HRAPF
101: NSARIVFLNE RPQPRIGKGV TNTCEICCRS LLDSFRFCSL GCKLGGMKRD PSLTFSLRGK HGREYEGEWE SDEATTPTKI RKTCAFNRLM SGLSISTVKC
201: DYLSGDQPSS SSGDESGFKL SPGTPPIYNH RNSSRRKGVP HRAPF
Arabidopsis Description
At1g76590 [Source:UniProtKB/TrEMBL;Acc:Q2HIW3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.