Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G505200.1 | Wheat | extracellular | 97.67 | 97.67 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 96.28 | 96.28 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 91.16 | 91.16 |
| Os01t0517800-01 | Rice | extracellular | 53.49 | 67.25 |
| EES15787 | Sorghum | endoplasmic reticulum | 63.72 | 64.02 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 67.44 | 63.32 |
| Os01t0518000-01 | Rice | cytosol | 61.86 | 61.29 |
| OQU78879 | Sorghum | endoplasmic reticulum | 60.47 | 61.03 |
| Zm00001d009292_P001 | Maize | extracellular | 60.0 | 60.28 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 52.09 | 52.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.09 | 51.61 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 51.16 | 51.4 |
| KRH19979 | Soybean | cytosol | 48.84 | 50.24 |
| Solyc10g085800.1.1 | Tomato | extracellular | 46.98 | 49.27 |
| PGSC0003DMT400022166 | Potato | extracellular | 46.98 | 49.27 |
| Bra034379.1-P | Field mustard | nucleus | 43.72 | 49.21 |
| CDY30518 | Canola | cytosol | 43.26 | 48.69 |
| CDX71409 | Canola | nucleus | 41.86 | 47.87 |
| Bra011992.1-P | Field mustard | nucleus | 41.4 | 47.09 |
| CDY04518 | Canola | nucleus | 41.4 | 47.09 |
| KRH32606 | Soybean | extracellular | 48.37 | 46.85 |
| KRH25132 | Soybean | cytosol | 47.91 | 46.82 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 47.91 | 46.61 |
| KRG96080 | Soybean | cytosol | 46.05 | 45.21 |
| AT2G27930.5 | Thale cress | plastid | 34.88 | 39.06 |
| KRH30543 | Soybean | nucleus | 32.09 | 38.33 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 40.93 | 38.26 |
| TraesCS2A01G496400.1 | Wheat | mitochondrion | 28.37 | 37.89 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 42.33 | 37.6 |
| TraesCS6A01G168400.1 | Wheat | cytosol | 36.74 | 36.74 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 40.93 | 35.77 |
| TraesCS2A01G496300.1 | Wheat | mitochondrion | 34.42 | 34.1 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 42.79 | 34.07 |
| TraesCS2A01G496500.1 | Wheat | nucleus | 24.19 | 32.91 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 40.93 | 32.0 |
| TraesCS1A01G068200.1 | Wheat | nucleus | 34.42 | 29.96 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 32.56 | 29.54 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 32.09 | 28.4 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 32.09 | 27.06 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 25.12 | 26.6 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G497600.1 | EnsemblPlantsGene:TraesCS3A01G497600 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF7 | PFAM:PF04640 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:15.5.43 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:723660728..723661831
Molecular Weight (calculated)
24217.6 Da
IEP (calculated)
7.799
GRAVY (calculated)
-0.467
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGMVPTWL ELLLATQFFT ICTNHLSSTR NECNLFCIDC EESKGGFCYY CRSRHHSTHR VIQIRRSSYH DVVRVAELKD ILDISDVQTY VINSATVVFL
101: NERPQHRGCG VSAIKASSSS YNCEICNRAL LDPFRFCSLG CNLKGIKEDM RTSVPIGDII DYTRKDDDTD SSNTSGNSGN NEGSCSDADY CKDNPSPPRV
201: IRHRRKGIPQ RAPFF
101: NERPQHRGCG VSAIKASSSS YNCEICNRAL LDPFRFCSLG CNLKGIKEDM RTSVPIGDII DYTRKDDDTD SSNTSGNSGN NEGSCSDADY CKDNPSPPRV
201: IRHRRKGIPQ RAPFF
001: MVSSIVKMEN DDVMTPPWLT PMLRADYFVT CSIHSQSSKS ECNLFCLDCS GNAFCSSCLA HHRTHRVIQI RRSSYHNVVR VSEIQKHIDI SCIQTYVINS
101: AKIFFLNARP QCRTGKSLNK TCQICSRNLL DSFLFCSLAC KLEGVKNGED PNLTLFHSGK SDDSSKIINT GICSRLIDGI SIAVDDQRSE TAGVLSPETP
201: SIESHRNYPM KSRRKGIPQR APF
101: AKIFFLNARP QCRTGKSLNK TCQICSRNLL DSFLFCSLAC KLEGVKNGED PNLTLFHSGK SDDSSKIINT GICSRLIDGI SIAVDDQRSE TAGVLSPETP
201: SIESHRNYPM KSRRKGIPQR APF
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT1G43000]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.