Factsheet for Bra034379.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30518	Canola	cytosol	94.76	94.76
Bra011992.1-P	Field mustard	nucleus	90.05	91.01
AT2G27930.5	Thale cress	plastid	72.25	71.88
Solyc10g085800.1.1	Tomato	extracellular	59.16	55.12
PGSC0003DMT400022166	Potato	extracellular	59.16	55.12
KRH19979	Soybean	cytosol	60.21	55.02
KRG96080	Soybean	cytosol	62.3	54.34
KRH32606	Soybean	extracellular	61.26	52.7
KRH67792	Soybean	cytosol, nucleus, plasma membrane	60.21	52.04
Os08t0560300-01	Rice	cytosol	52.88	50.5
KXG25377	Sorghum	extracellular	54.45	49.29
Zm00001d031925_P001	Maize	cytosol	54.45	49.06
GSMUA_Achr7P04460_001	Banana	extracellular	54.97	48.84
GSMUA_AchrUn_...	Banana	cytosol	54.97	48.39
Os01t0517800-01	Rice	extracellular	42.93	47.95
TraesCS7A01G281000.1	Wheat	cytosol	53.4	47.66
Zm00001d009292_P001	Maize	extracellular	51.31	45.79
EES15787	Sorghum	endoplasmic reticulum	51.31	45.79
Os11t0428700-00	Rice	cytosol	30.89	45.04
Bra003715.1-P	Field mustard	nucleus	38.74	44.85
HORVU3Hr1G110200.1	Barley	extracellular	50.26	44.65
OQU78879	Sorghum	endoplasmic reticulum	49.74	44.6
Bra035494.1-P	Field mustard	nucleus	50.26	43.84
TraesCS3D01G505200.1	Wheat	extracellular	49.21	43.72
TraesCS3A01G497600.1	Wheat	extracellular	49.21	43.72
TraesCS3D01G505000.1	Wheat	extracellular	48.69	43.26
TraesCS3B01G560400.1	Wheat	extracellular	48.69	43.26
HORVU7Hr1G059900.4	Barley	cytosol	48.69	43.26
VIT_08s0007g04560.t01	Wine grape	cytosol	51.83	43.04
TraesCS3B01G561000.1	Wheat	extracellular	48.17	42.79
TraesCS3B01G560600.1	Wheat	extracellular	47.64	42.13
Os01t0518000-01	Rice	cytosol	47.12	41.47
Bra015731.1-P	Field mustard	nucleus	50.79	40.76
Bra012263.1-P	Field mustard	cytosol	42.41	40.7
Bra012632.1-P	Field mustard	nucleus	45.55	40.65
Bra016441.1-P	Field mustard	cytosol	51.31	40.33
Bra025865.1-P	Field mustard	cytosol	50.79	39.75
Bra013266.1-P	Field mustard	nucleus	47.12	39.65
Bra021029.1-P	Field mustard	nucleus	46.07	39.29
Bra022055.1-P	Field mustard	nucleus	45.03	38.56
TraesCS7D01G279600.1	Wheat	cytosol	53.4	38.35
TraesCS7B01G180100.1	Wheat	cytosol	53.4	38.2
Bra017531.1-P	Field mustard	nucleus	44.5	37.12
Bra022058.1-P	Field mustard	nucleus	43.46	36.24
Bra025003.1-P	Field mustard	nucleus	42.41	35.84
Bra023280.1-P	Field mustard	mitochondrion	49.21	33.22
TraesCS3A01G497900.1	Wheat	cytosol	37.7	31.44
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	39.27	31.25
Bra014899.1-P	Field mustard	nucleus	39.27	30.49
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	34.03	28.26
Bra014478.1-P	Field mustard	cytosol	35.08	27.02
Bra037203.1-P	Field mustard	cytosol	35.6	26.67
Bra013149.1-P	Field mustard	cytosol	36.13	24.91
Bra023155.1-P	Field mustard	nucleus	30.89	18.15

Protein Annotations

EnsemblPlants:Bra034379.1	EnsemblPlants:Bra034379.1-P	EnsemblPlantsGene:Bra034379	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008270	InterPro:DUF597	InterPro:IPR000315	InterPro:Znf_B-box
ncoils:Coil	PANTHER:PTHR31065	PANTHER:PTHR31065:SF33	PFAM:PF04640	SEG:seg	SUPFAM:SSF57845
UniParc:UPI0002543C4E	UniProt:M4EZY6	MapMan:15.5.43	:	:	:

Description

AT2G27930 (E=6e-090) | binding

Coordinates

chrA04:+:12224122..12225189

Molecular Weight (calculated)

22384.8 Da

IEP (calculated)

9.260

GRAVY (calculated)

-0.791

Length

191 amino acids

Sequence
(BLAST)

001: MEEPKWLEGL LRTKFFNICP RHRETSRNEC NMFCLSCQNA PFCIYCRSSL HIDHPILQIR RSSYHDVVRV SEIEKVLDIR EVQTYVINSA RVLFINERPQ
101: PKNSSHGAAS STTTKTISYF CETCCRTLLD PFRFCSLGCK VEGMRKNKED EEERLRKERQ QETHKGTHPP THRTSNSRRR KGIPHRAPFA S

Best Arabidopsis Sequence Match ( AT2G27930.4 )
(BLAST)

001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS

Arabidopsis Description

PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.