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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04518 Canola nucleus 99.47 99.47
CDX71409 Canola nucleus 96.3 96.81
Bra034379.1-P Field mustard nucleus 91.01 90.05
AT2G27930.5 Thale cress plastid 69.84 68.75
Solyc10g085800.1.1 Tomato extracellular 58.2 53.66
PGSC0003DMT400022166 Potato extracellular 58.2 53.66
KRH19979 Soybean cytosol 59.26 53.59
KRG96080 Soybean cytosol 61.38 52.97
KRH32606 Soybean extracellular 60.32 51.35
KRH67792 Soybean cytosol, nucleus, plasma membrane 59.79 51.13
KXG25377 Sorghum extracellular 55.56 49.76
Zm00001d031925_P001 Maize cytosol 55.56 49.53
Os08t0560300-01 Rice cytosol 50.79 48.0
Bra003715.1-P Field mustard nucleus 41.8 47.88
TraesCS7A01G281000.1 Wheat cytosol 53.97 47.66
Os01t0517800-01 Rice extracellular 42.86 47.37
GSMUA_AchrUn_... Banana cytosol 53.97 47.0
GSMUA_Achr7P04460_001 Banana extracellular 53.44 46.98
Os11t0428700-00 Rice cytosol 30.16 43.51
EES15787 Sorghum endoplasmic reticulum 49.21 43.46
HORVU7Hr1G059900.4 Barley cytosol 49.21 43.26
Zm00001d009292_P001 Maize extracellular 48.68 42.99
HORVU3Hr1G110200.1 Barley extracellular 48.68 42.79
TraesCS3D01G505200.1 Wheat extracellular 47.62 41.86
OQU78879 Sorghum endoplasmic reticulum 47.09 41.78
Bra015731.1-P Field mustard nucleus 52.38 41.6
TraesCS3B01G560400.1 Wheat extracellular 47.09 41.4
TraesCS3A01G497600.1 Wheat extracellular 47.09 41.4
TraesCS3B01G561000.1 Wheat extracellular 47.09 41.4
TraesCS3D01G505000.1 Wheat extracellular 47.09 41.4
VIT_08s0007g04560.t01 Wine grape cytosol 50.26 41.3
Bra035494.1-P Field mustard nucleus 47.62 41.1
Bra016441.1-P Field mustard cytosol 52.38 40.74
TraesCS3B01G560600.1 Wheat extracellular 46.56 40.74
Bra012263.1-P Field mustard cytosol 42.86 40.7
Os01t0518000-01 Rice cytosol 46.56 40.55
Bra025865.1-P Field mustard cytosol 51.85 40.16
TraesCS7D01G279600.1 Wheat cytosol 53.97 38.35
Bra012632.1-P Field mustard nucleus 43.39 38.32
TraesCS7B01G180100.1 Wheat cytosol 53.97 38.2
Bra013266.1-P Field mustard nucleus 44.97 37.44
Bra022055.1-P Field mustard nucleus 43.92 37.22
Bra021029.1-P Field mustard nucleus 43.39 36.61
Bra022058.1-P Field mustard nucleus 42.86 35.37
Bra017531.1-P Field mustard nucleus 42.86 35.37
Bra025003.1-P Field mustard nucleus 41.27 34.51
Bra023280.1-P Field mustard mitochondrion 46.56 31.1
TraesCS3A01G497900.1 Wheat cytosol 35.98 29.69
Bra038403.1-P Field mustard cytosol, extracellular, nucleus 36.51 28.75
Bra014899.1-P Field mustard nucleus 36.51 28.05
Bra007550.1-P Field mustard extracellular, nucleus, vacuole 32.28 26.52
Bra014478.1-P Field mustard cytosol 33.33 25.4
Bra037203.1-P Field mustard cytosol 33.86 25.1
Bra013149.1-P Field mustard cytosol 33.86 23.1
Bra023155.1-P Field mustard nucleus 29.1 16.92
Protein Annotations
EnsemblPlants:Bra011992.1EnsemblPlants:Bra011992.1-PEnsemblPlantsGene:Bra011992InterPro:DUF597ncoils:CoilPANTHER:PTHR31065
PANTHER:PTHR31065:SF33PFAM:PF04640SEG:segUniParc:UPI000254193CUniProt:M4D684MapMan:15.5.43
Description
AT2G27930 (E=6e-088) | binding
Coordinates
chrA07:+:10706513..10707543
Molecular Weight (calculated)
22054.3 Da
IEP (calculated)
8.813
GRAVY (calculated)
-0.813
Length
189 amino acids
Sequence
(BLAST)
001: MEEPKWLEAL LRTNYFNICP RHCETPRNEC NMFCLSCQNA AFCIYCRTSL HIDHPVLQIR RSSYHNVVRV SEIEKVLDIR GVQNYVINSA RVLFLNERPQ
101: PKNSSHGPTS STTKTISYFC ETCCRTLLDP ARFCSLGCKV EEMRKNKEDE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG TPHRAPFAS
Best Arabidopsis Sequence Match ( AT2G27930.4 )
(BLAST)
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.