CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031925_P001	Maize	cytosol	91.0	90.57
TraesCS7A01G281000.1	Wheat	cytosol	80.57	79.44
Os08t0560300-01	Rice	cytosol	73.46	77.5
HORVU7Hr1G059900.4	Barley	cytosol	68.25	66.98
Os11t0428700-00	Rice	cytosol	41.23	66.41
TraesCS7B01G180100.1	Wheat	cytosol	80.57	63.67
TraesCS7D01G279600.1	Wheat	cytosol	80.09	63.53
GSMUA_AchrUn_...	Banana	cytosol	62.56	60.83
GSMUA_Achr7P04460_001	Banana	extracellular	58.29	57.21
Bra011992.1-P	Field mustard	nucleus	49.76	55.56
CDX71409	Canola	nucleus	49.29	55.32
PGSC0003DMT400022166	Potato	extracellular	53.55	55.12
Solyc10g085800.1.1	Tomato	extracellular	53.55	55.12
CDY04518	Canola	nucleus	49.29	55.03
KRH19979	Soybean	cytosol	54.5	55.02
Bra034379.1-P	Field mustard	nucleus	49.29	54.45
CDY30518	Canola	cytosol	48.82	53.93
KRH32606	Soybean	extracellular	54.98	52.25
KRH25132	Soybean	cytosol	53.55	51.36
KRG96080	Soybean	cytosol	53.08	51.14
KRH67792	Soybean	cytosol, nucleus, plasma membrane	52.61	50.23
EES15787	Sorghum	endoplasmic reticulum	50.71	50.0
OQU78879	Sorghum	endoplasmic reticulum	47.87	47.42
KRH30543	Soybean	nucleus	36.97	43.33
AT2G27930.5	Thale cress	plastid	38.39	42.19
VIT_08s0007g04560.t01	Wine grape	cytosol	45.97	42.17
KXG30975	Sorghum	nucleus	45.5	38.1
EES12755	Sorghum	nucleus	45.02	37.85
OQU84555	Sorghum	cytosol	23.22	37.12
OQU76729	Sorghum	cytosol, plastid	45.02	37.11
EER91885	Sorghum	nucleus	45.5	36.92
KXG29686	Sorghum	cytosol	29.38	32.46
EES04679	Sorghum	cytosol	28.91	31.77
KXG29636	Sorghum	nucleus	33.65	29.96
EES07500	Sorghum	nucleus	27.49	29.0
EER90181	Sorghum	cytosol	32.7	27.94
EES04603	Sorghum	nucleus	32.7	26.74

Protein Annotations

EnsemblPlants:KXG25377	EnsemblPlantsGene:SORBI_3007G167300	GO:GO:0003674	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	InterPro:DUF597
PANTHER:PTHR31065	PANTHER:PTHR31065:SF31	PFAM:PF04640	ProteinID:KXG25377	ProteinID:KXG25377.1	SEG:seg
UniParc:UPI0003C682B0	UniProt:A0A1B6PIC7	MapMan:15.5.43	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:60248903..60255522

Molecular Weight (calculated)

22636.8 Da

IEP (calculated)

9.046

GRAVY (calculated)

-0.338

Length

211 amino acids

Sequence
(BLAST)

001: MMLQRRVASA PVPDWLEALL ATRFFLACAA HPASPRNECN MFCLDCRGAP PPAFCYYCRA HRHSSHRVIQ IRRSSYHDVV RVSEVEDVLD ISGVQTYVIN
101: SARVLFLNER PQPRGAGAAA GKAAASPYNC EICGRALLDP FRFCSLGCKL VDTKRSNGHS AAAAADTDGG GAANGNDEAA EAAGGSKNGG PAARPQGRRR
201: KGTPHRAPFW S

Best Arabidopsis Sequence Match ( AT2G27930.4 )
(BLAST)

001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS

Arabidopsis Description

PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.