CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 3
plastid 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78879	Sorghum	endoplasmic reticulum	88.78	89.2
Zm00001d009292_P001	Maize	extracellular	85.51	85.51
TraesCS3A01G497600.1	Wheat	extracellular	64.02	63.72
TraesCS3D01G505200.1	Wheat	extracellular	63.55	63.26
HORVU3Hr1G110200.1	Barley	extracellular	63.55	63.26
Os01t0517800-01	Rice	extracellular	50.47	63.16
TraesCS3D01G505000.1	Wheat	extracellular	63.08	62.79
TraesCS3B01G560400.1	Wheat	extracellular	63.08	62.79
TraesCS3B01G561000.1	Wheat	extracellular	62.62	62.33
TraesCS3B01G560600.1	Wheat	extracellular	62.62	62.04
Os01t0518000-01	Rice	cytosol	57.48	56.68
Solyc10g085800.1.1	Tomato	extracellular	50.0	52.2
PGSC0003DMT400022166	Potato	extracellular	50.0	52.2
Bra034379.1-P	Field mustard	nucleus	45.79	51.31
CDY30518	Canola	cytosol	45.33	50.79
KXG25377	Sorghum	extracellular	50.0	50.71
CDX71409	Canola	nucleus	43.93	50.0
KRH19979	Soybean	cytosol	48.6	49.76
GSMUA_AchrUn_...	Banana	cytosol	50.0	49.31
Bra011992.1-P	Field mustard	nucleus	43.46	49.21
CDY04518	Canola	nucleus	43.46	49.21
GSMUA_Achr7P04460_001	Banana	extracellular	48.6	48.37
KRH25132	Soybean	cytosol	48.6	47.27
KRG96080	Soybean	cytosol	48.13	47.03
KRH32606	Soybean	extracellular	48.13	46.4
KRH67792	Soybean	cytosol, nucleus, plasma membrane	47.66	46.15
TraesCS3A01G497900.1	Wheat	cytosol	46.73	43.67
AT2G27930.5	Thale cress	plastid	36.92	41.15
KRH30543	Soybean	nucleus	34.58	41.11
OQU84555	Sorghum	cytosol	23.83	38.64
KXG30975	Sorghum	nucleus	44.86	38.1
EES12755	Sorghum	nucleus	43.93	37.45
OQU76729	Sorghum	cytosol, plastid	44.39	37.11
VIT_08s0007g04560.t01	Wine grape	cytosol	39.72	36.96
EES04679	Sorghum	cytosol	32.24	35.94
KXG29686	Sorghum	cytosol	31.31	35.08
EER91885	Sorghum	nucleus	42.52	35.0
KXG29636	Sorghum	nucleus	32.24	29.11
EES07500	Sorghum	nucleus	26.64	28.5
EER90181	Sorghum	cytosol	32.71	28.34
EES04603	Sorghum	nucleus	33.64	27.91

Protein Annotations

EnsemblPlants:EES15787	EnsemblPlantsGene:SORBI_3008G064400	EntrezGene:8057554	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF7
PFAM:PF04640	ProteinID:EES15787	ProteinID:EES15787.1	RefSeq:XP_002441949.1	SignalP:SignalP-noTM	UniParc:UPI0001A87FEA
UniProt:C5YT98	MapMan:15.5.43	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:7063212..7064392

Molecular Weight (calculated)

24090.7 Da

IEP (calculated)

7.803

GRAVY (calculated)

-0.405

Length

214 amino acids

Sequence
(BLAST)

001: MKREMVPSWL EILLATQFFT TCANHLLACR NECNLFCTQC EATPAAFCNY CRSINHSTHR VIQIRRSSYH DVVRVSEIED ILDISDVQTY VINSARVVFL
101: NERPQLRASG VPICKAPSSS THSCETCNRA LLDAFRFCSL GCNLKGLNME MSTPSMVENS PQSNGKDHVT MIDDVGSSTT SDKDSCNDKN NEEPPPKRVA
201: RHRRKGIPQR APFF

Best Arabidopsis Sequence Match ( AT2G27930.4 )
(BLAST)

001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS

Arabidopsis Description

PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.