CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

endoplasmic reticulum 4
plasma membrane 4
vacuole 4
golgi 4
extracellular 4
cytosol 1
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015394_P001	Maize	cytosol	84.5	82.58
GSMUA_Achr7P03600_001	Banana	nucleus	67.83	77.43
EER90181	Sorghum	cytosol	73.64	76.92
TraesCS6D01G146600.1	Wheat	cytosol	72.09	76.54
GSMUA_AchrUn_...	Banana	nucleus	65.12	75.34
TraesCS6A01G156600.1	Wheat	cytosol	70.93	75.31
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	60.85	64.61
CDX98234	Canola	cytosol	39.53	59.3
Solyc02g068510.1.1	Tomato	cytosol	55.04	58.92
KRH42391	Soybean	nucleus	44.96	58.0
KRH58510	Soybean	nucleus	43.41	56.28
VIT_01s0011g01410.t01	Wine grape	nucleus	56.2	55.56
CDY12444	Canola	nucleus	50.0	53.75
CDY27171	Canola	nucleus	50.0	53.75
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	50.0	53.75
AT1G31040.1	Thale cress	nucleus	50.0	53.09
Bra014899.1-P	Field mustard	nucleus	50.39	52.85
KRH12195	Soybean	cytosol	51.55	52.16
CDY02353	Canola	mitochondrion, nucleus	37.21	51.89
KRH37216	Soybean	cytosol	51.16	51.16
CDY43172	Canola	nucleus	39.15	50.25
KXG29636	Sorghum	nucleus	44.19	48.1
OQU78879	Sorghum	endoplasmic reticulum	28.29	34.27
EES15787	Sorghum	endoplasmic reticulum	27.91	33.64
KXG25377	Sorghum	extracellular	26.74	32.7
OQU76729	Sorghum	cytosol, plastid	31.78	32.03
EES07500	Sorghum	nucleus	24.81	32.0
KXG30975	Sorghum	nucleus	29.84	30.56
Bra023155.1-P	Field mustard	nucleus	38.37	30.46
EES12755	Sorghum	nucleus	29.46	30.28
EER91885	Sorghum	nucleus	29.07	28.85
OQU84555	Sorghum	cytosol	14.73	28.79
KXG29686	Sorghum	cytosol	18.99	25.65
EES04679	Sorghum	cytosol	18.22	24.48

Protein Annotations

MapMan:15.5.43	EntrezGene:8077185	UniProt:C5XW54	InterPro:DUF597	EnsemblPlants:EES04603	ProteinID:EES04603
ProteinID:EES04603.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008270	InterPro:IPR000315	PFAM:PF04640	PFscan:PS50119	PANTHER:PTHR31065	PANTHER:PTHR31065:SF32
EnsemblPlantsGene:SORBI_3004G057700	UniParc:UPI0001A855E6	RefSeq:XP_002451627.1	InterPro:Znf_B-box	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:4623958..4628017

Molecular Weight (calculated)

27698.9 Da

IEP (calculated)

8.173

GRAVY (calculated)

-0.371

Length

258 amino acids

Sequence
(BLAST)

001: MGMAPAGWVA GLVAESFFVA CPAHESRKKN ERNIFCLACC ASICPHCAPA HRHHPLLQVR RYVYHDVVRL GDLEKLIDCS CVQSYTINSA KVIFLKPRPQ
101: SRPFKGSGNI CLTCDRILQE PFHFCSLSCK VDHVMMQGGD LSNILQYYGG SGVAGDPDRL AFPRFENLRV DGSDLDDDTD GGQVTPNSIL EDPTQHYGNG
201: GGGGSSDNGG DTRVDGGARR GGEAAKRKKG GGFFPQIVLS LGGGGNRRKG APHRSPLA

Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)

001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.