Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 74.69 | 68.97 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 61.0 | 65.04 |
| KRH42391 | Soybean | nucleus | 52.7 | 63.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 57.68 | 62.33 |
| KRH58510 | Soybean | nucleus | 51.45 | 62.31 |
| CDX98234 | Canola | cytosol | 44.4 | 62.21 |
| KRH12195 | Soybean | cytosol | 64.32 | 60.78 |
| KRH37216 | Soybean | cytosol | 64.32 | 60.08 |
| AT1G31040.1 | Thale cress | nucleus | 59.34 | 58.85 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 58.92 | 58.44 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 58.51 | 58.02 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 51.04 | 58.02 |
| CDY12444 | Canola | nucleus | 57.68 | 57.92 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 57.68 | 57.92 |
| CDY27171 | Canola | nucleus | 57.26 | 57.5 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 53.53 | 56.58 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 56.85 | 56.38 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 44.4 | 56.02 |
| Bra014899.1-P | Field mustard | nucleus | 56.85 | 55.69 |
| Os02t0172800-01 | Rice | cytosol | 55.19 | 55.19 |
| EER90181 | Sorghum | cytosol | 56.43 | 55.06 |
| EES04603 | Sorghum | nucleus | 58.92 | 55.04 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 57.26 | 54.12 |
| CDY02353 | Canola | mitochondrion, nucleus | 41.49 | 54.05 |
| Os06t0666100-01 | Rice | nucleus | 58.51 | 54.02 |
| Zm00001d046958_P001 | Maize | nucleus | 56.02 | 54.0 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 56.85 | 53.94 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 56.43 | 53.54 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 56.85 | 53.52 |
| CDY43172 | Canola | nucleus | 43.15 | 51.74 |
| Zm00001d015394_P001 | Maize | cytosol | 55.19 | 50.38 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 43.98 | 42.4 |
| Solyc07g007320.1.1 | Tomato | cytosol | 44.81 | 42.35 |
| Solyc12g010470.1.1 | Tomato | cytosol | 41.91 | 41.06 |
| Solyc07g049130.1.1 | Tomato | nucleus | 25.73 | 38.99 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 25.73 | 38.99 |
| Bra023155.1-P | Field mustard | nucleus | 47.3 | 35.08 |
| Solyc06g061240.2.1 | Tomato | nucleus | 32.37 | 34.82 |
| Solyc10g085800.1.1 | Tomato | extracellular | 29.46 | 34.63 |
| Solyc02g033100.1.1 | Tomato | nucleus | 25.31 | 33.7 |
| Solyc08g005100.2.1 | Tomato | cytosol | 31.12 | 33.48 |
| Solyc08g076860.2.1 | Tomato | nucleus | 30.29 | 32.02 |
| Solyc04g008090.2.1 | Tomato | cytosol | 26.97 | 30.52 |
| Solyc02g036230.1.1 | Tomato | nucleus | 22.82 | 30.39 |
| Solyc02g033120.1.1 | Tomato | nucleus | 19.5 | 29.38 |
| Solyc02g033110.1.1 | Tomato | nucleus | 19.5 | 29.38 |
| Solyc02g036170.1.1 | Tomato | nucleus | 20.33 | 28.99 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 19.09 | 28.4 |
| Solyc02g036200.1.1 | Tomato | nucleus | 20.33 | 27.37 |
| Solyc02g036140.1.1 | Tomato | nucleus | 19.09 | 27.22 |
| Solyc02g036130.1.1 | Tomato | cytosol | 14.94 | 26.28 |
Protein Annotations
| EnsemblPlants:Solyc02g068510.1.1 | EnsemblPlantsGene:Solyc02g068510.1 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 |
| UniParc:UPI0002767AF8 | UniProt:K4B7I3 | MapMan:15.5.43 | : | : | : |
Description
No Description!
Coordinates
chr2:-:38464522..38467608
Molecular Weight (calculated)
27397.6 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.445
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMMKPAWL QGLMSENFFG GCEIHQNRRK NEKNIFCLEC CQSFCPHCLP QHHSHPLLQV RRYVYQDVIR LDDLEKLIDC SYIQPYTINS AKVIFLNQRA
101: QSRSCKASGN SCFTCDRVLQ NPFNFCSLSC KVDFMVYQGE DLSNIICKFD DSEFALSQFE GLHVDTSDLI DEESQITPNS ILEDPLECRG SSCSNNVRGN
201: SGISHDGRMV KNKKKSSGFF PGLVLSLSNR RKGAPQRSPL S
101: QSRSCKASGN SCFTCDRVLQ NPFNFCSLSC KVDFMVYQGE DLSNIICKFD DSEFALSQFE GLHVDTSDLI DEESQITPNS ILEDPLECRG SSCSNNVRGN
201: SGISHDGRMV KNKKKSSGFF PGLVLSLSNR RKGAPQRSPL S
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.