Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02353 | Canola | mitochondrion, nucleus | 77.11 | 83.78 |
| CDY12444 | Canola | nucleus | 78.61 | 65.83 |
| CDY27171 | Canola | nucleus | 78.11 | 65.42 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 77.61 | 65.0 |
| CDX98234 | Canola | cytosol | 40.8 | 47.67 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 45.27 | 47.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.25 | 45.29 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 50.25 | 44.69 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 57.71 | 44.44 |
| KRH12195 | Soybean | cytosol | 55.22 | 43.53 |
| KRH42391 | Soybean | nucleus | 43.28 | 43.5 |
| Solyc02g068510.1.1 | Tomato | cytosol | 51.74 | 43.15 |
| KRH37216 | Soybean | cytosol | 54.73 | 42.64 |
| KRH58510 | Soybean | nucleus | 41.79 | 42.21 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 43.78 | 41.51 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 46.27 | 40.79 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 49.25 | 40.74 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 48.76 | 40.33 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 48.26 | 39.92 |
| EES04603 | Sorghum | nucleus | 50.25 | 39.15 |
| EER90181 | Sorghum | cytosol | 47.76 | 38.87 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 49.25 | 38.82 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 49.25 | 38.67 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 48.76 | 38.58 |
| Zm00001d046958_P001 | Maize | nucleus | 47.76 | 38.4 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 48.26 | 38.19 |
| Os02t0172800-01 | Rice | cytosol | 45.77 | 38.17 |
| Zm00001d015394_P001 | Maize | cytosol | 49.75 | 37.88 |
| Os06t0666100-01 | Rice | nucleus | 48.76 | 37.55 |
| CDY30518 | Canola | cytosol | 26.87 | 28.27 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 32.34 | 28.26 |
| CDX89067 | Canola | cytosol | 34.83 | 28.23 |
| CDY48369 | Canola | cytosol | 34.83 | 28.11 |
| CDY37203 | Canola | cytosol | 35.32 | 27.84 |
| CDX81439 | Canola | cytosol | 35.32 | 27.73 |
| CDX71409 | Canola | nucleus | 25.87 | 27.66 |
| CDX71792 | Canola | cytosol | 33.33 | 27.57 |
| CDY04518 | Canola | nucleus | 25.87 | 27.51 |
| CDX89603 | Canola | cytosol | 35.82 | 25.99 |
| CDX93111 | Canola | cytosol | 35.82 | 25.99 |
| CDX76551 | Canola | nucleus | 28.86 | 25.89 |
| CDX90437 | Canola | nucleus | 27.36 | 25.7 |
| CDY01500 | Canola | nucleus | 27.36 | 25.7 |
| CDY08880 | Canola | nucleus | 28.36 | 25.45 |
| CDY44504 | Canola | nucleus | 28.36 | 25.11 |
| CDX78810 | Canola | nucleus | 28.36 | 25.11 |
| CDY03199 | Canola | nucleus | 27.86 | 24.89 |
| CDX88300 | Canola | nucleus | 28.86 | 24.47 |
| CDY35177 | Canola | nucleus | 27.86 | 24.45 |
| CDX87583 | Canola | nucleus | 28.86 | 24.37 |
| CDY69918 | Canola | nucleus | 27.36 | 24.34 |
| CDY69910 | Canola | nucleus | 27.36 | 24.34 |
| CDY72135 | Canola | cytosol, nucleus | 25.87 | 24.19 |
| CDY01340 | Canola | cytosol | 27.86 | 24.03 |
| CDY36264 | Canola | nucleus | 22.89 | 23.96 |
| CDX68093 | Canola | nucleus | 27.86 | 23.43 |
| CDY29486 | Canola | cytosol | 28.36 | 23.36 |
| CDY04591 | Canola | cytosol | 28.36 | 23.36 |
| CDY00356 | Canola | cytosol | 28.36 | 23.36 |
| CDY66745 | Canola | nucleus | 25.87 | 23.32 |
| CDY33661 | Canola | cytosol | 27.36 | 22.63 |
| CDX85958 | Canola | nucleus | 27.36 | 22.0 |
| CDX87686 | Canola | nucleus | 24.88 | 21.64 |
| CDX87684 | Canola | nucleus | 24.88 | 21.28 |
| CDX96610 | Canola | cytosol | 27.36 | 20.83 |
| CDY17645 | Canola | nucleus | 23.38 | 20.17 |
| CDY09414 | Canola | cytosol | 21.89 | 20.0 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 26.37 | 18.66 |
| CDY44664 | Canola | plasma membrane | 26.37 | 18.03 |
| CDY06424 | Canola | cytosol | 17.91 | 15.79 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 23.88 | 13.19 |
Protein Annotations
| EnsemblPlants:CDY43172 | EnsemblPlantsGene:GSBRNA2T00076166001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 |
| ProteinID:CDY43172 | ProteinID:CDY43172.1 | SEG:seg | UniParc:UPI0004EF216A | UniProt:A0A078HZ53 | MapMan:15.5.43 |
Description
BnaCnng11000DBnaCnng11000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ53]
Coordinates
chrLK032547:+:123743..132659
Molecular Weight (calculated)
23538.1 Da
IEP (calculated)
8.712
GRAVY (calculated)
-0.603
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNLHLPSHI LRNKDSRDYS IQKNYPWFVN CQVRRYVYHD VVRLNDLEKL IDCSYIQPYT INGAKVIFIN QRPQSRVKVS SNVCFTCDRI LREPFNFCSL
101: SCKVDYLVCQ GYDLSCILYR IDESDFTFSS LRMNGHDQLR EISTMEDETD DIVVISDRSE EGNNSNKKEK RKKKKESNYL PGMVLSVGSR RKGAPHRAPF
201: S
101: SCKVDYLVCQ GYDLSCILYR IDESDFTFSS LRMNGHDQLR EISTMEDETD DIVVISDRSE EGNNSNKKEK RKKKKESNYL PGMVLSVGSR RKGAPHRAPF
201: S
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.