Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012263.1-P | Field mustard | cytosol | 84.98 | 99.5 |
| CDY00356 | Canola | cytosol | 96.57 | 92.21 |
| CDY29486 | Canola | cytosol | 95.28 | 90.98 |
| CDY04591 | Canola | cytosol | 94.42 | 90.16 |
| CDY33661 | Canola | cytosol | 91.85 | 88.07 |
| AT1G21000.1 | Thale cress | cytosol | 92.7 | 87.8 |
| CDX96610 | Canola | cytosol | 91.42 | 80.68 |
| CDX68093 | Canola | nucleus | 81.12 | 79.08 |
| CDX87583 | Canola | nucleus | 80.26 | 78.57 |
| CDX88300 | Canola | nucleus | 79.83 | 78.48 |
| CDX85958 | Canola | nucleus | 81.12 | 75.6 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 55.36 | 70.11 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 57.94 | 66.83 |
| PGSC0003DMT400025721 | Potato | plastid | 49.36 | 66.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.65 | 65.35 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 61.37 | 63.0 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 58.37 | 56.2 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 58.37 | 56.2 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 57.94 | 55.79 |
| HORVU7Hr1G093120.4 | Barley | cytosol | 56.65 | 55.23 |
| Os06t0624900-01 | Rice | cytosol | 59.66 | 54.94 |
| OQU76729 | Sorghum | cytosol, plastid | 58.8 | 53.52 |
| CDY01500 | Canola | nucleus | 48.5 | 52.8 |
| CDX71409 | Canola | nucleus | 42.06 | 52.13 |
| CDX90437 | Canola | nucleus | 47.64 | 51.87 |
| CDY04518 | Canola | nucleus | 41.63 | 51.32 |
| CDY08880 | Canola | nucleus | 48.93 | 50.89 |
| CDX76551 | Canola | nucleus | 48.5 | 50.45 |
| CDX78810 | Canola | nucleus | 48.5 | 49.78 |
| CDY44504 | Canola | nucleus | 48.5 | 49.78 |
| CDY30518 | Canola | cytosol | 40.34 | 49.21 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 66.09 | 46.81 |
| CDY72135 | Canola | cytosol, nucleus | 42.49 | 46.05 |
| CDY03199 | Canola | nucleus | 42.92 | 44.44 |
| CDY35177 | Canola | nucleus | 43.35 | 44.1 |
| CDY69918 | Canola | nucleus | 42.49 | 43.81 |
| CDY69910 | Canola | nucleus | 42.49 | 43.81 |
| CDY66745 | Canola | nucleus | 41.63 | 43.5 |
| CDX87686 | Canola | nucleus | 42.49 | 42.86 |
| CDX87684 | Canola | nucleus | 42.06 | 41.7 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 50.64 | 41.55 |
| CDY06424 | Canola | cytosol | 39.48 | 40.35 |
| CDY44664 | Canola | plasma membrane | 50.64 | 40.14 |
| CDX98234 | Canola | cytosol | 25.32 | 34.3 |
| CDY27171 | Canola | nucleus | 30.47 | 29.58 |
| CDY12444 | Canola | nucleus | 30.04 | 29.17 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 45.49 | 29.12 |
| CDX81439 | Canola | cytosol | 31.76 | 28.91 |
| CDY37203 | Canola | cytosol | 31.33 | 28.63 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 27.9 | 28.26 |
| CDY36264 | Canola | nucleus | 23.18 | 28.12 |
| CDY43172 | Canola | nucleus | 24.03 | 27.86 |
| CDX71792 | Canola | cytosol | 28.76 | 27.57 |
| CDX89067 | Canola | cytosol | 29.18 | 27.42 |
| CDY48369 | Canola | cytosol | 28.76 | 26.91 |
| CDX93111 | Canola | cytosol | 31.33 | 26.35 |
| CDX89603 | Canola | cytosol | 30.9 | 25.99 |
| CDY02353 | Canola | mitochondrion, nucleus | 20.6 | 25.95 |
| CDY09414 | Canola | cytosol | 23.61 | 25.0 |
| CDY17645 | Canola | nucleus | 24.89 | 24.89 |
Protein Annotations
| EnsemblPlants:CDY01340 | EnsemblPlantsGene:GSBRNA2T00112308001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF12 | PFAM:PF04640 | ProteinID:CDY01340 | ProteinID:CDY01340.1 | SUPFAM:SSF57845 | UniParc:UPI0004EE703D |
| MapMan:15.5.43 | : | : | : | : | : |
Description
BnaA07g11130D
Coordinates
chrLK031926:-:393070..394333
Molecular Weight (calculated)
26478.8 Da
IEP (calculated)
9.046
GRAVY (calculated)
-0.490
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRIEEEEDY MSPPWLMPML RGSYFVPCSI HADSNKNECN LFCLDCAGTA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKYIDITCV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMKRGDQSLT FSVRGKHGRE YQGGGSESDE ATTPTKMRKT NAFNRLMSGL SISTVRFDDY
201: GLGSDHRFSP GTPPIYNHRN SSRRKGIPHR APF
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMKRGDQSLT FSVRGKHGRE YQGGGSESDE ATTPTKMRKT NAFNRLMSGL SISTVRFDDY
201: GLGSDHRFSP GTPPIYNHRN SSRRKGIPHR APF
001: MVSSIVKMEN DDVMTPPWLT PMLRADYFVT CSIHSQSSKS ECNLFCLDCS GNAFCSSCLA HHRTHRVIQI RRSSYHNVVR VSEIQKHIDI SCIQTYVINS
101: AKIFFLNARP QCRTGKSLNK TCQICSRNLL DSFLFCSLAC KLEGVKNGED PNLTLFHSGK SDDSSKIINT GICSRLIDGI SIAVDDQRSE TAGVLSPETP
201: SIESHRNYPM KSRRKGIPQR APF
101: AKIFFLNARP QCRTGKSLNK TCQICSRNLL DSFLFCSLAC KLEGVKNGED PNLTLFHSGK SDDSSKIINT GICSRLIDGI SIAVDDQRSE TAGVLSPETP
201: SIESHRNYPM KSRRKGIPQR APF
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT1G43000]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.