Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035494.1-P | Field mustard | nucleus | 73.47 | 98.63 |
| AT1G32700.1 | Thale cress | cytosol | 65.99 | 91.08 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 82.99 | 85.92 |
| KRH75604 | Soybean | nucleus | 53.74 | 75.24 |
| KRH74408 | Soybean | nucleus | 57.82 | 72.03 |
| KRH39550 | Soybean | nucleus | 57.48 | 71.61 |
| PGSC0003DMT400045164 | Potato | nucleus | 54.08 | 70.04 |
| CDY01500 | Canola | nucleus | 50.68 | 69.63 |
| Solyc08g076860.2.1 | Tomato | nucleus | 53.4 | 68.86 |
| CDY08880 | Canola | nucleus | 52.38 | 68.75 |
| CDX76551 | Canola | nucleus | 52.38 | 68.75 |
| PGSC0003DMT400046007 | Potato | cytosol | 52.38 | 68.75 |
| CDX90437 | Canola | nucleus | 50.0 | 68.69 |
| PGSC0003DMT400019836 | Potato | nucleus | 51.7 | 68.16 |
| Solyc06g061240.2.1 | Tomato | nucleus | 51.36 | 67.41 |
| CDY44504 | Canola | nucleus | 52.04 | 67.4 |
| CDX78810 | Canola | nucleus | 51.36 | 66.52 |
| Solyc08g005100.2.1 | Tomato | cytosol | 50.34 | 66.07 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 57.82 | 64.89 |
| CDY35177 | Canola | nucleus | 46.94 | 60.26 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 50.68 | 60.08 |
| Os04t0591100-01 | Rice | nucleus | 50.68 | 59.84 |
| CDY03199 | Canola | nucleus | 45.58 | 59.56 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 50.34 | 59.44 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 49.66 | 59.35 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 49.66 | 59.35 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 49.32 | 58.94 |
| EES12755 | Sorghum | nucleus | 49.66 | 58.17 |
| Os02t0692700-01 | Rice | nucleus | 50.34 | 57.59 |
| CDY69910 | Canola | nucleus | 44.22 | 57.52 |
| CDY69918 | Canola | nucleus | 43.88 | 57.08 |
| Zm00001d002489_P001 | Maize | nucleus | 49.66 | 57.03 |
| KXG30975 | Sorghum | nucleus | 48.64 | 56.75 |
| Zm00001d026047_P002 | Maize | nucleus | 48.3 | 56.13 |
| Zm00001d017682_P001 | Maize | nucleus | 47.96 | 55.95 |
| CDY66745 | Canola | nucleus | 41.84 | 55.16 |
| Zm00001d051511_P001 | Maize | nucleus | 46.6 | 54.58 |
| CDX87686 | Canola | nucleus | 42.86 | 54.55 |
| CDY72135 | Canola | cytosol, nucleus | 39.46 | 53.95 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 50.34 | 53.82 |
| CDX87684 | Canola | nucleus | 41.5 | 51.91 |
| CDY01340 | Canola | cytosol | 40.14 | 50.64 |
| CDX87583 | Canola | nucleus | 40.48 | 50.0 |
| CDX68093 | Canola | nucleus | 40.48 | 49.79 |
| CDX88300 | Canola | nucleus | 40.14 | 49.79 |
| CDY30518 | Canola | cytosol | 31.63 | 48.69 |
| CDY00356 | Canola | cytosol | 40.14 | 48.36 |
| CDY29486 | Canola | cytosol | 39.8 | 47.95 |
| CDY04591 | Canola | cytosol | 39.8 | 47.95 |
| CDX71409 | Canola | nucleus | 30.61 | 47.87 |
| CDY33661 | Canola | cytosol | 39.46 | 47.74 |
| CDY04518 | Canola | nucleus | 30.61 | 47.62 |
| CDX85958 | Canola | nucleus | 39.12 | 46.0 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 56.12 | 45.33 |
| CDX96610 | Canola | cytosol | 39.8 | 44.32 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 43.54 | 39.88 |
| CDX98234 | Canola | cytosol | 21.09 | 36.05 |
| CDY06424 | Canola | cytosol | 25.51 | 32.89 |
| CDX81439 | Canola | cytosol | 27.21 | 31.25 |
| CDY37203 | Canola | cytosol | 26.87 | 30.98 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 24.15 | 30.87 |
| CDY36264 | Canola | nucleus | 20.07 | 30.73 |
| CDX89067 | Canola | cytosol | 25.85 | 30.65 |
| CDY48369 | Canola | cytosol | 25.85 | 30.52 |
| CDY12444 | Canola | nucleus | 24.49 | 30.0 |
| CDY27171 | Canola | nucleus | 24.49 | 30.0 |
| CDX71792 | Canola | cytosol | 24.15 | 29.22 |
| CDX93111 | Canola | cytosol | 26.87 | 28.52 |
| CDX89603 | Canola | cytosol | 26.53 | 28.16 |
| CDY09414 | Canola | cytosol | 20.41 | 27.27 |
| CDY17645 | Canola | nucleus | 21.43 | 27.04 |
| CDY43172 | Canola | nucleus | 18.03 | 26.37 |
| CDY02353 | Canola | mitochondrion, nucleus | 16.33 | 25.95 |
Protein Annotations
| EnsemblPlants:CDY44664 | EnsemblPlantsGene:GSBRNA2T00080637001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 | PFAM:PF04640 |
| ProteinID:CDY44664 | ProteinID:CDY44664.1 | SEG:seg | UniParc:UPI0004EEC55A | UniProt:A0A078I5A5 | MapMan:15.5.43 |
Description
BnaA08g06760DBnaA08g06760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5A5]
Coordinates
chrLK032598:-:186765..194166
Molecular Weight (calculated)
32949.4 Da
IEP (calculated)
9.272
GRAVY (calculated)
-0.321
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MIYYILRAII NPPVGRAKPY NISASGLGSV VVDFCADKNA SSFLFLHAHV SLSLSLSLSL KLAIEENQQA SVREIMGAEE ENSKSWPPWL KPLLQEKFFV
101: QCKLHADSHK SECNMYCLDC TNGPLCSFCL SFHKDHHAIQ IRRSSYHDVI RVSEIQKFLD ITGVQTYVIN SAKVVFLNER PQPRPGKGVV NTCQVCYRSL
201: VDSFRFCSLG CKISGTSKNF DKKRKDWTNN LSDSDDSYSS TTTSNGRLKK NSDMINNNSF TPSTPPLSAV NGRIVKRRKG IPHRAPFGGL ITEY
101: QCKLHADSHK SECNMYCLDC TNGPLCSFCL SFHKDHHAIQ IRRSSYHDVI RVSEIQKFLD ITGVQTYVIN SAKVVFLNER PQPRPGKGVV NTCQVCYRSL
201: VDSFRFCSLG CKISGTSKNF DKKRKDWTNN LSDSDDSYSS TTTSNGRLKK NSDMINNNSF TPSTPPLSAV NGRIVKRRKG IPHRAPFGGL ITEY
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.