Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G448300.1 | Wheat | cytosol | 99.59 | 99.59 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 98.78 | 98.78 |
| Os04t0591100-01 | Rice | nucleus | 86.99 | 85.94 |
| EES12755 | Sorghum | nucleus | 82.93 | 81.27 |
| Zm00001d002489_P001 | Maize | nucleus | 82.11 | 78.91 |
| Zm00001d026047_P002 | Maize | nucleus | 79.27 | 77.08 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 76.42 | 75.5 |
| KRH75604 | Soybean | nucleus | 64.23 | 75.24 |
| KRH74408 | Soybean | nucleus | 66.26 | 69.07 |
| PGSC0003DMT400045164 | Potato | nucleus | 63.01 | 68.28 |
| KRH39550 | Soybean | nucleus | 65.45 | 68.22 |
| Solyc08g076860.2.1 | Tomato | nucleus | 62.2 | 67.11 |
| KRH24008 | Soybean | cytosol | 60.57 | 66.82 |
| AT1G32700.1 | Thale cress | cytosol | 57.72 | 66.67 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 59.76 | 65.92 |
| Bra035494.1-P | Field mustard | nucleus | 58.54 | 65.75 |
| Solyc06g061240.2.1 | Tomato | nucleus | 59.76 | 65.62 |
| PGSC0003DMT400046007 | Potato | cytosol | 59.76 | 65.62 |
| PGSC0003DMT400019836 | Potato | nucleus | 59.35 | 65.47 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 60.57 | 64.5 |
| Solyc08g005100.2.1 | Tomato | cytosol | 58.54 | 64.29 |
| CDY01500 | Canola | nucleus | 55.69 | 64.02 |
| KRH27687 | Soybean | cytosol | 60.57 | 63.95 |
| CDY08880 | Canola | nucleus | 57.72 | 63.39 |
| CDX90437 | Canola | nucleus | 54.88 | 63.08 |
| Bra012632.1-P | Field mustard | nucleus | 54.88 | 63.08 |
| Bra021029.1-P | Field mustard | nucleus | 57.32 | 62.95 |
| CDX76551 | Canola | nucleus | 57.32 | 62.95 |
| AT4G17900.1 | Thale cress | nucleus | 57.72 | 62.56 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 65.85 | 61.83 |
| CDY44504 | Canola | nucleus | 56.91 | 61.67 |
| CDX78810 | Canola | nucleus | 56.5 | 61.23 |
| Bra013266.1-P | Field mustard | nucleus | 56.1 | 60.79 |
| KRH77790 | Soybean | nucleus | 61.38 | 60.16 |
| CDY35177 | Canola | nucleus | 53.25 | 57.21 |
| CDY03199 | Canola | nucleus | 52.03 | 56.89 |
| Bra017531.1-P | Field mustard | nucleus | 52.85 | 56.77 |
| CDY69910 | Canola | nucleus | 51.63 | 56.19 |
| Bra025003.1-P | Field mustard | nucleus | 51.22 | 55.75 |
| CDY69918 | Canola | nucleus | 51.22 | 55.75 |
| AT5G46710.1 | Thale cress | nucleus | 48.37 | 52.65 |
| Bra022055.1-P | Field mustard | nucleus | 47.56 | 52.47 |
| CDY66745 | Canola | nucleus | 47.56 | 52.47 |
| CDY72135 | Canola | cytosol, nucleus | 45.53 | 52.09 |
| CDX87686 | Canola | nucleus | 48.78 | 51.95 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 59.35 | 51.41 |
| Bra022058.1-P | Field mustard | nucleus | 47.15 | 50.66 |
| Bra023280.1-P | Field mustard | mitochondrion | 58.13 | 50.53 |
| CDY44664 | Canola | plasma membrane | 59.35 | 49.66 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 53.66 | 49.62 |
| CDX87684 | Canola | nucleus | 47.15 | 49.36 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 44.72 | 45.45 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 36.18 | 41.4 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 36.18 | 41.4 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 35.37 | 41.23 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 34.55 | 38.81 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 36.99 | 36.4 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 38.21 | 35.34 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 31.3 | 35.16 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 27.64 | 34.87 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 49.19 | 33.24 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 26.02 | 31.53 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 30.08 | 31.22 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 29.27 | 29.63 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 28.86 | 27.95 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G447400.1 | EnsemblPlantsGene:TraesCS2D01G447400 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:557257711..557259653
Molecular Weight (calculated)
27070.4 Da
IEP (calculated)
9.241
GRAVY (calculated)
-0.415
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHDEAPLL LRINTARGGH MGGGECDEAE NQRWPPWLKP LLATSFFGQC KMHADAHKCE CNMYCLDCVN GALCSQCLAY HHGHHAIQIR RSSYHDVIRV
101: SEIQKVLDIT GVQTYIINSA RVVFLNERPQ PRPGKGVTNT CDVCERSLLD TFRFCSLGCK IVGTSGEFRG RKRHAGGKKM KLKLKKAAAS DSDDSSTITS
201: GGSDKSSVVQ SFSPSTPPAT ANSYRSAKRR KGIPHRSPFG SLIVEF
101: SEIQKVLDIT GVQTYIINSA RVVFLNERPQ PRPGKGVTNT CDVCERSLLD TFRFCSLGCK IVGTSGEFRG RKRHAGGKKM KLKLKKAAAS DSDDSSTITS
201: GGSDKSSVVQ SFSPSTPPAT ANSYRSAKRR KGIPHRSPFG SLIVEF
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.