Factsheet for Bra023280.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G32700.1	Thale cress	cytosol	69.61	92.49
Bra035494.1-P	Field mustard	nucleus	69.26	89.5
KRH75604	Soybean	nucleus	56.89	76.67
KRH74408	Soybean	nucleus	60.42	72.46
KRH39550	Soybean	nucleus	60.07	72.03
PGSC0003DMT400045164	Potato	nucleus	56.18	70.04
Bra012632.1-P	Field mustard	nucleus	52.3	69.16
Solyc08g076860.2.1	Tomato	nucleus	55.48	68.86
Bra021029.1-P	Field mustard	nucleus	54.42	68.75
PGSC0003DMT400019836	Potato	nucleus	53.71	68.16
Solyc06g061240.2.1	Tomato	nucleus	53.36	67.41
PGSC0003DMT400046007	Potato	cytosol	53.36	67.41
Bra013266.1-P	Field mustard	nucleus	53.71	66.96
VIT_02s0012g01400.t01	Wine grape	nucleus	61.48	66.41
Solyc08g005100.2.1	Tomato	cytosol	51.24	64.73
Bra017531.1-P	Field mustard	nucleus	49.12	60.7
TraesCS6B01G291400.1	Wheat	nucleus	52.3	59.68
TraesCS6D01G250500.1	Wheat	nucleus	51.94	59.04
Os04t0591100-01	Rice	nucleus	51.59	58.63
Bra003715.1-P	Field mustard	nucleus	33.92	58.18
TraesCS2D01G447400.1	Wheat	cytosol	50.53	58.13
TraesCS2A01G448300.1	Wheat	cytosol	50.53	58.13
Bra025003.1-P	Field mustard	nucleus	46.29	57.96
TraesCS2B01G469000.1	Wheat	cytosol	50.18	57.72
Os02t0692700-01	Rice	nucleus	51.94	57.2
KXG30975	Sorghum	nucleus	50.88	57.14
EES12755	Sorghum	nucleus	50.53	56.97
Zm00001d017682_P001	Maize	nucleus	50.18	56.35
Zm00001d002489_P001	Maize	nucleus	50.53	55.86
Zm00001d051511_P001	Maize	nucleus	49.47	55.78
Bra022055.1-P	Field mustard	nucleus	43.46	55.16
Zm00001d026047_P002	Maize	nucleus	49.12	54.94
TraesCS6A01G264400.2	Wheat	nucleus	51.94	53.45
Bra022058.1-P	Field mustard	nucleus	42.76	52.84
Bra012263.1-P	Field mustard	cytosol	35.69	50.75
Bra015731.1-P	Field mustard	nucleus	42.05	50.0
Bra034379.1-P	Field mustard	nucleus	33.22	49.21
Bra016441.1-P	Field mustard	cytosol	40.99	47.74
Bra025865.1-P	Field mustard	cytosol	40.99	47.54
Bra011992.1-P	Field mustard	nucleus	31.1	46.56
CDY01253	Canola	cytosol, endoplasmic reticulum, golgi, plastid	59.01	45.88
HORVU6Hr1G067060.3	Barley	nucleus, plastid	46.64	41.12
Bra014478.1-P	Field mustard	cytosol	27.92	31.85
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	25.44	31.3
Bra037203.1-P	Field mustard	cytosol	27.92	30.98
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	25.44	30.0
Bra014899.1-P	Field mustard	nucleus	25.8	29.67
Bra013149.1-P	Field mustard	cytosol	28.27	28.88
Bra023155.1-P	Field mustard	nucleus	18.73	16.31

Protein Annotations

EnsemblPlants:Bra023280.1	EnsemblPlants:Bra023280.1-P	EnsemblPlantsGene:Bra023280	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF8
PFAM:PF04640	SEG:seg	UniParc:UPI0002542271	UniProt:M4E3C9	MapMan:15.5.43	:

Description

AT1G32700 (E=7e-105) | zinc-binding family protein

Coordinates

chrA09:-:19985247..19988328

Molecular Weight (calculated)

32139.8 Da

IEP (calculated)

10.189

GRAVY (calculated)

-0.441

Length

283 amino acids

Sequence
(BLAST)

001: MKRTGPSSGI IVIRHQVISV DRHFLISLTA SSRELYNSLF SKKLGIEENN QATTVRESKP TSKRIIMGAE EEKNKMWPPW LKPLLREKFF VQCKLHADSH
101: KSECNMYCLD CTSGPLCSLC LSFHKDHHAI QIRRSSYHDV IRVSEIQKFL DITGVQTYVI NSAKVVFLNE RPQPRPGKGV VNTCEVCYRS LVDSFRFCSL
201: GCKISGISRS FDKKKKDWTN NLSDSNDSYS SSTSIGRLKK NGDMIHNSFT PSTPPLSAVY RRIAKRRKGI PHRAPLGGLI IEY

Best Arabidopsis Sequence Match ( AT1G32700.1 )
(BLAST)

001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.