Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39550 | Soybean | nucleus | 97.88 | 97.88 |
| KRH75604 | Soybean | nucleus | 82.63 | 92.86 |
| PGSC0003DMT400045164 | Potato | nucleus | 79.66 | 82.82 |
| Solyc08g076860.2.1 | Tomato | nucleus | 78.81 | 81.58 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 87.71 | 79.01 |
| PGSC0003DMT400046007 | Potato | cytosol | 73.31 | 77.23 |
| CDY01500 | Canola | nucleus | 69.49 | 76.64 |
| Solyc06g061240.2.1 | Tomato | nucleus | 72.46 | 76.34 |
| PGSC0003DMT400019836 | Potato | nucleus | 72.03 | 76.23 |
| AT1G32700.1 | Thale cress | cytosol | 68.64 | 76.06 |
| CDX90437 | Canola | nucleus | 68.64 | 75.7 |
| AT4G17900.1 | Thale cress | nucleus | 72.46 | 75.33 |
| Bra012632.1-P | Field mustard | nucleus | 68.22 | 75.23 |
| Bra035494.1-P | Field mustard | nucleus | 69.49 | 74.89 |
| CDX78810 | Canola | nucleus | 71.61 | 74.45 |
| CDY44504 | Canola | nucleus | 71.19 | 74.01 |
| KRH24008 | Soybean | cytosol | 69.92 | 73.99 |
| CDX76551 | Canola | nucleus | 69.92 | 73.66 |
| Solyc08g005100.2.1 | Tomato | cytosol | 69.92 | 73.66 |
| CDY08880 | Canola | nucleus | 69.49 | 73.21 |
| Bra021029.1-P | Field mustard | nucleus | 69.49 | 73.21 |
| Bra013266.1-P | Field mustard | nucleus | 70.34 | 73.13 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 68.22 | 72.2 |
| KRH27687 | Soybean | cytosol | 69.49 | 70.39 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 71.61 | 68.15 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 71.19 | 67.47 |
| Os04t0591100-01 | Rice | nucleus | 70.76 | 67.07 |
| KXG30975 | Sorghum | nucleus | 71.61 | 67.06 |
| Os02t0692700-01 | Rice | nucleus | 72.88 | 66.93 |
| KRH77790 | Soybean | nucleus | 70.76 | 66.53 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 69.07 | 66.26 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 68.64 | 65.85 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 68.64 | 65.85 |
| EES12755 | Sorghum | nucleus | 69.49 | 65.34 |
| Zm00001d051511_P001 | Maize | nucleus | 68.64 | 64.54 |
| Zm00001d017682_P001 | Maize | nucleus | 68.64 | 64.29 |
| CDY35177 | Canola | nucleus | 62.29 | 64.19 |
| CDY69918 | Canola | nucleus | 61.44 | 64.16 |
| CDY69910 | Canola | nucleus | 61.44 | 64.16 |
| Bra017531.1-P | Field mustard | nucleus | 61.86 | 63.76 |
| CDY03199 | Canola | nucleus | 60.59 | 63.56 |
| Bra025003.1-P | Field mustard | nucleus | 60.59 | 63.27 |
| Zm00001d002489_P001 | Maize | nucleus | 68.22 | 62.89 |
| Zm00001d026047_P002 | Maize | nucleus | 67.37 | 62.85 |
| KRH13451 | Soybean | cytosol | 25.85 | 62.24 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 71.19 | 61.09 |
| Bra023280.1-P | Field mustard | mitochondrion | 72.46 | 60.42 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 72.46 | 60.21 |
| CDY66745 | Canola | nucleus | 55.93 | 59.19 |
| Bra022055.1-P | Field mustard | nucleus | 55.93 | 59.19 |
| CDX87686 | Canola | nucleus | 57.63 | 58.87 |
| Bra022058.1-P | Field mustard | nucleus | 56.36 | 58.08 |
| CDY44664 | Canola | plasma membrane | 72.03 | 57.82 |
| CDY72135 | Canola | cytosol, nucleus | 52.54 | 57.67 |
| CDX87684 | Canola | nucleus | 56.78 | 57.02 |
| AT5G46710.1 | Thale cress | nucleus | 54.24 | 56.64 |
| KRH45433 | Soybean | plastid | 55.93 | 56.41 |
| KRH19979 | Soybean | cytosol | 48.31 | 54.55 |
| KRH32606 | Soybean | extracellular | 49.15 | 52.25 |
| KRG96080 | Soybean | cytosol | 47.88 | 51.6 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 48.31 | 51.58 |
| KRH25132 | Soybean | cytosol | 44.92 | 48.18 |
| KRH30543 | Soybean | nucleus | 33.05 | 43.33 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 58.05 | 42.68 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 57.63 | 37.36 |
| KRH58510 | Soybean | nucleus | 31.36 | 37.19 |
| KRH42391 | Soybean | nucleus | 30.93 | 36.5 |
| KRH37216 | Soybean | cytosol | 36.86 | 33.72 |
| KRG88921 | Soybean | nucleus | 34.32 | 33.47 |
| KRH12195 | Soybean | cytosol | 35.59 | 32.94 |
| KRH12861 | Soybean | nucleus | 32.63 | 32.22 |
| KRH37851 | Soybean | nucleus | 32.2 | 31.8 |
| KRH20236 | Soybean | nucleus | 32.2 | 30.77 |
| KRH03576 | Soybean | nucleus | 32.2 | 30.65 |
| KRH75326 | Soybean | extracellular, plasma membrane | 35.17 | 29.96 |
| KRH41746 | Soybean | nucleus | 30.08 | 29.83 |
| KRH60448 | Soybean | nucleus | 30.08 | 29.83 |
| KRH49692 | Soybean | nucleus | 27.97 | 29.33 |
| KRH28037 | Soybean | cytosol, nucleus, plastid | 29.66 | 28.81 |
| KRH72960 | Soybean | nucleus | 12.29 | 28.71 |
Protein Annotations
| EMBL:ACUP02000022 | EMBL:KJ790196 | EnsemblPlants:KRH74408 | EnsemblPlantsGene:GLYMA_01G017700 | EntrezGene:100797900 | InterPro:DUF597 |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 | PFAM:PF04640 | ProteinID:KRH74408 | ProteinID:KRH74408.1 | SEG:seg |
| UniParc:UPI00023377EB | UniProt:I1J4V0 | MapMan:15.5.43 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:1689030..1691957
Molecular Weight (calculated)
26756.3 Da
IEP (calculated)
9.645
GRAVY (calculated)
-0.581
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIENQDTAV REIKPKNRRI MGAGGPDDED NRWPPWLKPL LKESFFVQCK LHADSHKSEC NMYCLDCMNG PLCSLCLAHH KDHRAIQIRR SSYHDVIRVS
101: EIQKVLDITG VQTYIINSAR VVFLNERPQP RPGKGVTNTC EVCERSLLDS FRFCSLGCKI VGTSKNFQKR KKQSMAMSSD SEDSYSSNSV HGLKKNCKVQ
201: SFTPSTPPPT SVNYRTAKRR KGIPHRAPMV GLIIEY
101: EIQKVLDITG VQTYIINSAR VVFLNERPQP RPGKGVTNTC EVCERSLLDS FRFCSLGCKI VGTSKNFQKR KKQSMAMSSD SEDSYSSNSV HGLKKNCKVQ
201: SFTPSTPPPT SVNYRTAKRR KGIPHRAPMV GLIIEY
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.