CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75604	Soybean	nucleus	62.24	29.05
KRH24008	Soybean	cytosol	63.27	27.8
KRH27687	Soybean	cytosol	65.31	27.47
KRH29309	Soybean	cytoskeleton, cytosol, nucleus	62.24	27.35
KRH77790	Soybean	nucleus	67.35	26.29
KRH39550	Soybean	nucleus	62.24	25.85
KRH74408	Soybean	nucleus	62.24	25.85
KRH72960	Soybean	nucleus	25.51	24.75
GSMUA_Achr5P13970_001	Banana	nucleus	60.2	24.38
GSMUA_Achr8P14740_001	Banana	cytosol	56.12	23.91
GSMUA_Achr5P18120_001	Banana	nucleus	58.16	23.75
GSMUA_Achr4P27280_001	Banana	nucleus	60.2	23.69
GSMUA_Achr5P03420_001	Banana	cytosol	57.14	23.53
GSMUA_Achr2P18160_001	Banana	plasma membrane	59.18	22.92
GSMUA_Achr11P...	Banana	nucleus	54.08	21.99
GSMUA_Achr4P19110_001	Banana	nucleus	56.12	21.48
KRH19979	Soybean	cytosol	42.86	20.1
Os10t0574700-01	Rice	nucleus	51.02	19.68
KRH67792	Soybean	cytosol, nucleus, plasma membrane	43.88	19.46
TraesCS1B01G207700.1	Wheat	cytosol, mitochondrion, nucleus	51.02	19.46
KRH32606	Soybean	extracellular	42.86	18.92
Zm00001d030032_P002	Maize	nucleus	48.98	18.9
EER91885	Sorghum	nucleus	50.0	18.85
TraesCS1D01G196400.1	Wheat	cytosol, mitochondrion, nucleus	51.02	18.8
KRG96080	Soybean	cytosol	41.84	18.72
KRH25132	Soybean	cytosol	41.84	18.64
TraesCS1A01G192800.1	Wheat	cytosol, mitochondrion, nucleus	51.02	18.52
Zm00001d047025_P001	Maize	nucleus	48.98	18.39
KRH30543	Soybean	nucleus	30.61	16.67
HORVU1Hr1G050480.5	Barley	cytosol, nucleus	48.98	15.34
KRH42391	Soybean	nucleus	30.61	15.0
KRH58510	Soybean	nucleus	29.59	14.57
KRH37851	Soybean	nucleus	33.67	13.81
KRH12861	Soybean	nucleus	33.67	13.81
KRH20236	Soybean	nucleus	33.67	13.36
KRH12195	Soybean	cytosol	34.69	13.33
KRH03576	Soybean	nucleus	33.67	13.31
KRH28037	Soybean	cytosol, nucleus, plastid	32.65	13.17
KRH37216	Soybean	cytosol	33.67	12.79
KRH49692	Soybean	nucleus	28.57	12.44
KRG88921	Soybean	nucleus	30.61	12.4
KRH60448	Soybean	nucleus	29.59	12.18
KRH41746	Soybean	nucleus	29.59	12.18
KRH75326	Soybean	extracellular, plasma membrane	30.61	10.83
KRH45433	Soybean	plastid	25.51	10.68

Protein Annotations

EMBL:ACUP02009730	EnsemblPlants:KRH13451	EnsemblPlantsGene:GLYMA_15G240100	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF8
PFAM:PF04640	ProteinID:KRH13451	ProteinID:KRH13451.1	UniParc:UPI0002953353	UniProt:K7MDI9	MapMan:15.5.43

Description

hypothetical protein

Coordinates

chr15:-:45499529..45500080

Molecular Weight (calculated)

11151.3 Da

IEP (calculated)

8.295

GRAVY (calculated)

-0.466

Length

98 amino acids

Sequence
(BLAST)

1: MKKKTSGHHG LGHFSKQAFF VQCKVHTDFH KSECNTYCSD CMNGALCSDC LASNREHKAI QTRRSSYHDA TRVSEIQKIL EITGVETYIT CAKIVFYE

Best Arabidopsis Sequence Match ( AT1G32700.1 )
(BLAST)

001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.