Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P03420_001 | Banana | cytosol | 69.92 | 75.21 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 71.48 | 73.49 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 69.14 | 73.14 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 68.36 | 72.92 |
| GSMUA_Achr11P... | Banana | nucleus | 65.62 | 69.71 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 59.38 | 66.09 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 60.16 | 60.87 |
| Os10t0574700-01 | Rice | nucleus | 55.86 | 56.3 |
| KRH13451 | Soybean | cytosol | 21.48 | 56.12 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 56.25 | 56.03 |
| Zm00001d030032_P002 | Maize | nucleus | 55.08 | 55.51 |
| EER91885 | Sorghum | nucleus | 55.86 | 55.0 |
| Zm00001d047025_P001 | Maize | nucleus | 55.86 | 54.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.97 | 54.46 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 42.58 | 53.96 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 55.86 | 53.76 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 38.28 | 53.26 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 55.47 | 52.59 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 42.58 | 48.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.62 | 47.93 |
| KRH45433 | Soybean | plastid | 41.8 | 45.73 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 38.28 | 45.58 |
| HORVU1Hr1G050480.5 | Barley | cytosol, nucleus | 48.83 | 39.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.86 | 36.92 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 29.69 | 33.63 |
| GSMUA_Achr11P... | Banana | cytosol | 30.08 | 33.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.12 | 32.29 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 26.56 | 32.08 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 29.3 | 30.86 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 26.95 | 30.26 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 28.52 | 29.44 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 27.34 | 28.0 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 20.7 | 27.75 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 29.69 | 26.67 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 28.12 | 25.35 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P19110_001 | EnsemblPlants:GSMUA_Achr4T19110_001 | EnsemblPlantsGene:GSMUA_Achr4G19110_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 |
| PFAM:PF04640 | SEG:seg | UniParc:UPI00029535AB | UniProt:M0SQ74 | MapMan:15.5.43 | : |
Description
Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr4G19110_001]
Coordinates
chr4:+:20156663..20158428
Molecular Weight (calculated)
28709.3 Da
IEP (calculated)
9.953
GRAVY (calculated)
-0.655
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGDEKLKKK KGGFLSNDRE SPFRELNIKN RRTMGGGGTV EEEGGRWPPW LRPLLSTNFF VQCKYHADSH RNECNMYCLD CMSGALCSFC LDRHSGHHPI
101: QIRRSSYHDV IRVSEIQKVL DLTGVQTYII NSARVVFLNE RPQPRPRKGV TNSCEVCGRS LLDSFRFCSL GCKMAGTAPD RKRKNKILHE AIKIKSTTES
201: DTDESYTSTS RGSEKSNVTH SFTPSTPPPT AASLSSAKRR KGIPHRAPFG SLILEF
101: QIRRSSYHDV IRVSEIQKVL DLTGVQTYII NSARVVFLNE RPQPRPRKGV TNSCEVCGRS LLDSFRFCSL GCKMAGTAPD RKRKNKILHE AIKIKSTTES
201: DTDESYTSTS RGSEKSNVTH SFTPSTPPPT AASLSSAKRR KGIPHRAPFG SLILEF
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.