Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P03420_001 | Banana | cytosol | 76.67 | 77.31 |
| GSMUA_Achr11P... | Banana | nucleus | 76.25 | 75.93 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 72.08 | 75.22 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 76.25 | 73.49 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 73.33 | 72.73 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 72.92 | 68.36 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 70.83 | 67.19 |
| KRH13451 | Soybean | cytosol | 23.75 | 58.16 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 48.33 | 57.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.5 | 56.44 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 42.5 | 55.43 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 49.58 | 52.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.0 | 49.77 |
| KRH45433 | Soybean | plastid | 47.08 | 48.29 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 42.92 | 47.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.58 | 38.78 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 32.5 | 34.51 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 29.58 | 33.49 |
| GSMUA_Achr11P... | Banana | cytosol | 32.5 | 33.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.83 | 33.18 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 32.5 | 32.1 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 30.42 | 32.02 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 31.25 | 30.24 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 30.83 | 29.6 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 32.92 | 27.72 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 21.67 | 27.23 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 31.67 | 26.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P18120_001 | EnsemblPlants:GSMUA_Achr5T18120_001 | EnsemblPlantsGene:GSMUA_Achr5G18120_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 |
| PFAM:PF04640 | SEG:seg | UniParc:UPI000296D834 | UniProt:M0SZJ1 | MapMan:15.5.43 | : |
Description
Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr5G18120_001]
Coordinates
chr5:+:19421712..19423350
Molecular Weight (calculated)
26885.9 Da
IEP (calculated)
9.684
GRAVY (calculated)
-0.647
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDQESPFK ELNLKNRRVM GGGGPADDNR WPPWLRPLLS TRFFVPCKLH ADSHKSECNM YCLDCTGGAL CSLCLNHHRD HRTIQIRRSS YHDVIRVSEI
101: QKVLDITGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDSFR FCSLGCKISG TGNDYNGSRT NKSTTKKAMA EASDSEESYT SSSRGNEKSN
201: NVKQSFTPST PPPAVVSYRS AKRRKGIPHR APFGSRILEF
101: QKVLDITGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDSFR FCSLGCKISG TGNDYNGSRT NKSTTKKAMA EASDSEESYT SSSRGNEKSN
201: NVKQSFTPST PPPAVVSYRS AKRRKGIPHR APFGSRILEF
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.