Factsheet for GSMUA_Achr6P36360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	77.23	77.23
GSMUA_Achr7P20650_001	Banana	cytosol	69.31	76.09
GSMUA_Achr9P12280_001	Banana	cytosol	72.77	64.76
PGSC0003DMT400025721	Potato	plastid	51.98	60.34
Bra012263.1-P	Field mustard	cytosol	57.43	58.29
CDY01340	Canola	cytosol	66.83	57.94
AT1G21000.1	Thale cress	cytosol	70.3	57.72
CDY04591	Canola	cytosol	69.31	57.38
Bra025865.1-P	Field mustard	cytosol	68.81	56.97
CDY29486	Canola	cytosol	68.81	56.97
Bra003715.1-P	Field mustard	nucleus	46.04	56.36
CDY00356	Canola	cytosol	67.82	56.15
Bra016441.1-P	Field mustard	cytosol	66.34	55.14
CDX68093	Canola	nucleus	64.85	54.81
CDX87583	Canola	nucleus	64.36	54.62
Bra015731.1-P	Field mustard	nucleus	64.36	54.62
CDX88300	Canola	nucleus	63.86	54.43
CDY33661	Canola	cytosol	65.35	54.32
TraesCS7D01G390300.1	Wheat	cytosol	64.36	53.72
TraesCS7A01G394800.1	Wheat	cytosol	64.36	53.72
TraesCS7B01G296800.1	Wheat	cytosol	63.37	52.89
Os06t0624900-01	Rice	cytosol	65.84	52.57
AT1G76590.1	Thale cress	cytosol	63.37	52.24
CDX85958	Canola	nucleus	63.86	51.6
AT1G43000.2	Thale cress	cytosol	56.93	51.57
HORVU7Hr1G093120.4	Barley	cytosol	60.89	51.46
OQU76729	Sorghum	cytosol, plastid	64.36	50.78
CDX96610	Canola	cytosol	65.84	50.38
GSMUA_Achr5P18120_001	Banana	nucleus	57.43	48.33
GSMUA_Achr8P14740_001	Banana	cytosol	54.46	47.83
GSMUA_Achr5P03420_001	Banana	cytosol	54.95	46.64
GSMUA_Achr5P13970_001	Banana	nucleus	54.95	45.87
GSMUA_Achr4P27280_001	Banana	nucleus	56.44	45.78
GSMUA_Achr2P18160_001	Banana	plasma membrane	56.44	45.06
GSMUA_Achr11P...	Banana	nucleus	53.47	44.81
GSMUA_Achr4P19110_001	Banana	nucleus	53.96	42.58
GSMUA_AchrUn_...	Banana	cytosol	45.54	42.4
GSMUA_Achr7P04460_001	Banana	extracellular	45.05	42.33
VIT_18s0122g00320.t01	Wine grape	cytosol	64.36	39.51
GSMUA_AchrUn_...	Banana	nucleus	37.13	35.05
GSMUA_Achr7P03600_001	Banana	nucleus	36.63	32.74
GSMUA_AchrUn_...	Banana	nucleus	36.14	32.74
GSMUA_Achr11P...	Banana	cytosol	37.62	32.62
GSMUA_Achr2P02580_001	Banana	nucleus	34.16	32.55
CDY06424	Canola	cytosol	35.64	31.58
GSMUA_Achr9P30790_001	Banana	nucleus	35.15	31.14
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	36.14	30.04
GSMUA_Achr6P20140_001	Banana	extracellular	27.23	28.8
GSMUA_Achr9P22490_001	Banana	mitochondrion	35.15	28.63
GSMUA_Achr6P30690_001	Banana	nucleus	33.66	27.2
GSMUA_Achr6P35220_001	Banana	nucleus	36.63	25.96
GSMUA_Achr1P09990_001	Banana	nucleus, plastid	35.15	25.0

Protein Annotations

EnsemblPlants:GSMUA_Achr6P36360_001	EnsemblPlants:GSMUA_Achr6T36360_001	EnsemblPlantsGene:GSMUA_Achr6G36360_001	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF12
PFAM:PF04640	SEG:seg	UniParc:UPI0002964BE8	UniProt:M0TD78	MapMan:15.5.43	:

Description

Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr6G36360_001]

Coordinates

chr6:+:34379642..34380509

Molecular Weight (calculated)

22648.1 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.391

Length

202 amino acids

Sequence
(BLAST)

001: MTSPMFRLGN EDTGPPWLRP LLKASFFVPC QFHGDSNKSE CNLYCLDCMG NALCSYCLPG HKDHDVVQIR RSSYHNVIRV SEVSKFIDIS CIQTYIINSA
101: KIVFLNERPQ SRPGKGVTNA CEICSRNLLD SFRFCSIGCK LEGMRTDPEL TFTLHPKPRR EPMHGSESDE SSTGSSISSG TPPIVISYRT SRRKGVPHRA
201: PF

Best Arabidopsis Sequence Match ( AT1G21000.1 )
(BLAST)

001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF

Arabidopsis Description

At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.