Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P03600_001 | Banana | nucleus | 74.49 | 80.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 71.19 | 77.58 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 64.61 | 74.06 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 68.72 | 73.25 |
| EER90181 | Sorghum | cytosol | 63.37 | 62.35 |
| Os06t0666100-01 | Rice | nucleus | 66.67 | 62.07 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 61.73 | 61.73 |
| Zm00001d046958_P001 | Maize | nucleus | 63.37 | 61.6 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 64.2 | 61.42 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 48.15 | 61.26 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 64.2 | 61.18 |
| Os02t0172800-01 | Rice | cytosol | 60.49 | 61.0 |
| EES04603 | Sorghum | nucleus | 64.61 | 60.85 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 63.79 | 60.55 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 60.49 | 60.49 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 62.55 | 59.84 |
| CDX98234 | Canola | cytosol | 41.98 | 59.3 |
| Zm00001d015394_P001 | Maize | cytosol | 63.37 | 58.33 |
| KRH42391 | Soybean | nucleus | 46.91 | 57.0 |
| Solyc02g068510.1.1 | Tomato | cytosol | 56.38 | 56.85 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 60.91 | 56.7 |
| KRH58510 | Soybean | nucleus | 45.27 | 55.28 |
| AT1G31040.1 | Thale cress | nucleus | 53.91 | 53.91 |
| KRH37216 | Soybean | cytosol | 57.2 | 53.88 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 53.09 | 53.75 |
| CDY12444 | Canola | nucleus | 53.09 | 53.75 |
| KRH12195 | Soybean | cytosol | 55.97 | 53.33 |
| CDY27171 | Canola | nucleus | 52.67 | 53.33 |
| Bra014899.1-P | Field mustard | nucleus | 53.91 | 53.25 |
| CDY02353 | Canola | mitochondrion, nucleus | 39.09 | 51.35 |
| CDY43172 | Canola | nucleus | 40.74 | 49.25 |
| GSMUA_Achr11P... | Banana | cytosol | 45.27 | 47.21 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 48.15 | 47.18 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 42.39 | 41.2 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 45.27 | 38.73 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.28 | 37.62 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 44.03 | 37.54 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 30.04 | 36.14 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 25.93 | 34.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.04 | 34.11 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 30.86 | 33.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.22 | 32.72 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 30.86 | 32.61 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 32.1 | 32.5 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 28.4 | 32.09 |
| GSMUA_Achr11P... | Banana | nucleus | 31.69 | 31.95 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 31.69 | 31.82 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 32.1 | 31.33 |
| Bra023155.1-P | Field mustard | nucleus | 41.56 | 31.08 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 29.63 | 30.25 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 31.28 | 30.04 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 30.86 | 29.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P33510_001 | EnsemblPlants:GSMUA_Achr8T33510_001 | EnsemblPlantsGene:GSMUA_Achr8G33510_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 | PFscan:PS50119 | SEG:seg | UniParc:UPI000294FDCD |
| UniProt:M0TVV3 | MapMan:15.5.43 | : | : | : | : |
Description
zinc-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G33510_001]
Coordinates
chr8:-:34548686..34550559
Molecular Weight (calculated)
26979.4 Da
IEP (calculated)
7.834
GRAVY (calculated)
-0.160
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRREYGGGG NAMAAAAAAT GLPGWLGRLV EESFFVGCGT HESRKKNEKN IFCLDCCTSI CTHCAPAHSS HPLLQKKTIK VSPIILLRMT SSPFCPLVRR
101: YVYNDVVRLD DLEKLIDCSY VQPYTINSAK VVFLKPRPQS RPFKGSGNIC LTCDRILQEP FHFCSLSCKV DHVLLQGEDL SSILFRFNES DFAFSTFENL
201: RMDSSDLIDD DGQVTTPSSI LEDPIVLSLS NRRKGAPHRS PLS
101: YVYNDVVRLD DLEKLIDCSY VQPYTINSAK VVFLKPRPQS RPFKGSGNIC LTCDRILQEP FHFCSLSCKV DHVLLQGEDL SSILFRFNES DFAFSTFENL
201: RMDSSDLIDD DGQVTTPSSI LEDPIVLSLS NRRKGAPHRS PLS
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.