Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P03420_001 | Banana | cytosol | 75.9 | 79.41 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 73.49 | 76.25 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 71.08 | 73.14 |
| GSMUA_Achr11P... | Banana | nucleus | 70.28 | 72.61 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 73.49 | 71.48 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 63.86 | 69.13 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 66.27 | 65.22 |
| KRH13451 | Soybean | cytosol | 23.69 | 60.2 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 45.78 | 56.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.38 | 55.94 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 39.76 | 53.8 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 46.18 | 50.66 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.97 | 49.31 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 39.76 | 46.05 |
| KRH45433 | Soybean | plastid | 42.57 | 45.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.33 | 38.78 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 32.13 | 35.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.52 | 34.08 |
| GSMUA_Achr11P... | Banana | cytosol | 30.52 | 32.62 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 31.33 | 32.1 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 27.31 | 32.08 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 28.51 | 31.14 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 30.52 | 30.65 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 29.72 | 29.6 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 21.69 | 28.27 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 31.73 | 27.72 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 29.72 | 26.06 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P27280_001 | EnsemblPlants:GSMUA_Achr4T27280_001 | EnsemblPlantsGene:GSMUA_Achr4G27280_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 |
| PFAM:PF04640 | SEG:seg | UniParc:UPI000296D4E8 | UniProt:M0SSJ0 | MapMan:15.5.43 | : |
Description
zinc-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G27280_001]
Coordinates
chr4:-:26173356..26174790
Molecular Weight (calculated)
27866.2 Da
IEP (calculated)
10.069
GRAVY (calculated)
-0.655
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQVAIDRES PFKELDSKNR GIMGAGGKEE EEEQWPPWLR PLLSTSFFVQ CKRHADAHKS ECNMYCLDCM NGALCSLCLA RHSDHRSIQI RRSSYHDVIR
101: VSEIQKVLDI TGVQTYIINS ARVVFLNERP QQRPGKGVTN ICEVCERSLV DSFRFCSLGC KIAGAASDYN RKKKNHPQKK KNKKKTKQPT AASDSDASDT
201: STSRGSVKSN ATQSFTPSTP PPTAASFRSA KRRKGIPHRA PFGSIMLEF
101: VSEIQKVLDI TGVQTYIINS ARVVFLNERP QQRPGKGVTN ICEVCERSLV DSFRFCSLGC KIAGAASDYN RKKKNHPQKK KNKKKTKQPT AASDSDASDT
201: STSRGSVKSN ATQSFTPSTP PPTAASFRSA KRRKGIPHRA PFGSIMLEF
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.