Factsheet for GSMUA_Achr7P20650_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P36360_001	Banana	cytosol	76.09	69.31
GSMUA_AchrUn_...	Banana	cytosol	75.54	68.81
PGSC0003DMT400025721	Potato	plastid	60.33	63.79
GSMUA_Achr9P12280_001	Banana	cytosol	78.26	63.44
CDY29486	Canola	cytosol	74.46	56.15
Bra025865.1-P	Field mustard	cytosol	74.46	56.15
CDY04591	Canola	cytosol	73.91	55.74
CDY01340	Canola	cytosol	70.11	55.36
AT1G21000.1	Thale cress	cytosol	73.91	55.28
CDY00356	Canola	cytosol	72.83	54.92
Bra016441.1-P	Field mustard	cytosol	71.74	54.32
Bra012263.1-P	Field mustard	cytosol	58.7	54.27
CDY33661	Canola	cytosol	71.2	53.91
AT1G76590.1	Thale cress	cytosol	70.11	52.65
CDX87583	Canola	nucleus	67.93	52.52
Bra015731.1-P	Field mustard	nucleus	67.93	52.52
CDX88300	Canola	nucleus	67.39	52.32
CDX68093	Canola	nucleus	67.39	51.88
CDX96610	Canola	cytosol	71.2	49.62
CDX85958	Canola	nucleus	67.39	49.6
TraesCS7D01G390300.1	Wheat	cytosol	64.67	49.17
TraesCS7A01G394800.1	Wheat	cytosol	64.67	49.17
TraesCS7B01G296800.1	Wheat	cytosol	64.13	48.76
Os06t0624900-01	Rice	cytosol	66.85	48.62
Bra003715.1-P	Field mustard	nucleus	42.93	47.88
OQU76729	Sorghum	cytosol, plastid	65.22	46.88
HORVU7Hr1G093120.4	Barley	cytosol	60.87	46.86
AT1G43000.2	Thale cress	cytosol	51.63	42.6
GSMUA_Achr5P18120_001	Banana	nucleus	55.43	42.5
GSMUA_Achr5P03420_001	Banana	cytosol	53.26	41.18
GSMUA_Achr8P14740_001	Banana	cytosol	51.09	40.87
GSMUA_Achr4P27280_001	Banana	nucleus	53.8	39.76
GSMUA_Achr11P...	Banana	nucleus	51.63	39.42
GSMUA_Achr5P13970_001	Banana	nucleus	51.63	39.26
GSMUA_Achr2P18160_001	Banana	plasma membrane	53.8	39.13
GSMUA_Achr4P19110_001	Banana	nucleus	53.26	38.28
GSMUA_AchrUn_...	Banana	cytosol	44.57	37.79
GSMUA_Achr7P04460_001	Banana	extracellular	42.39	36.28
VIT_18s0122g00320.t01	Wine grape	cytosol	64.13	35.87
GSMUA_AchrUn_...	Banana	nucleus	36.41	31.31
GSMUA_Achr7P03600_001	Banana	nucleus	34.78	28.32
GSMUA_AchrUn_...	Banana	nucleus	34.24	28.25
GSMUA_Achr6P20140_001	Banana	extracellular	28.8	27.75
GSMUA_Achr2P02580_001	Banana	nucleus	30.98	26.89
GSMUA_Achr9P30790_001	Banana	nucleus	32.61	26.32
GSMUA_Achr11P...	Banana	cytosol	33.15	26.18
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	34.24	25.93
GSMUA_Achr9P22490_001	Banana	mitochondrion	32.61	24.19
CDY06424	Canola	cytosol	29.89	24.12
GSMUA_Achr6P30690_001	Banana	nucleus	30.43	22.4
GSMUA_Achr6P35220_001	Banana	nucleus	34.24	22.11
GSMUA_Achr1P09990_001	Banana	nucleus, plastid	32.61	21.13

Protein Annotations

EnsemblPlants:GSMUA_Achr7P20650_001	EnsemblPlants:GSMUA_Achr7T20650_001	EnsemblPlantsGene:GSMUA_Achr7G20650_001	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF12
PFAM:PF04640	SEG:seg	UniParc:UPI0002958DE7	UniProt:M0TJA2	MapMan:15.5.43	:

Description

Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr7G20650_001]

Coordinates

chr7:+:23727491..23728619

Molecular Weight (calculated)

20407.7 Da

IEP (calculated)

9.545

GRAVY (calculated)

-0.314

Length

184 amino acids

Sequence
(BLAST)

001: MYCLDCMGNA LCSYCLPDHK DHHVVQIRRS SYHNVIRVSE VSKFIDISYI QTYIINSAKI VFLNERPQPR PGKGVTNTCE ICCRSLLDSF RFCSIGCKLG
101: GMKTDPDLTF ALRPKPGREW MHGSESDESS TPRKVRKTLA FGRSIVVPAA SAAGSEGGSI SPGTPPILSY RTSRRKGIPH RAPF

Best Arabidopsis Sequence Match ( AT1G21000.2 )
(BLAST)

001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF

Arabidopsis Description

At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.