Factsheet for Bra025865.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29486	Canola	cytosol	100.0	100.0
Bra012263.1-P	Field mustard	cytosol	77.87	95.48
Bra016441.1-P	Field mustard	cytosol	93.44	93.83
AT1G21000.1	Thale cress	cytosol	93.85	93.09
Bra015731.1-P	Field mustard	nucleus	81.56	83.61
Bra003715.1-P	Field mustard	nucleus	50.41	74.55
GSMUA_Achr7P20650_001	Banana	cytosol	56.15	74.46
GSMUA_Achr6P36360_001	Banana	cytosol	56.97	68.81
GSMUA_AchrUn_...	Banana	cytosol	56.15	67.82
PGSC0003DMT400025721	Potato	plastid	47.95	67.24
GSMUA_Achr9P12280_001	Banana	cytosol	60.66	65.2
TraesCS7D01G390300.1	Wheat	cytosol	56.56	57.02
TraesCS7A01G394800.1	Wheat	cytosol	56.56	57.02
Os06t0624900-01	Rice	cytosol	58.61	56.52
HORVU7Hr1G093120.4	Barley	cytosol	54.92	56.07
TraesCS7B01G296800.1	Wheat	cytosol	55.33	55.79
OQU76729	Sorghum	cytosol, plastid	57.79	55.08
Bra035494.1-P	Field mustard	nucleus	47.54	52.97
Bra012632.1-P	Field mustard	nucleus	45.49	51.87
Bra011992.1-P	Field mustard	nucleus	40.16	51.85
Bra021029.1-P	Field mustard	nucleus	46.72	50.89
Bra034379.1-P	Field mustard	nucleus	39.75	50.79
Bra013266.1-P	Field mustard	nucleus	46.31	49.78
VIT_18s0122g00320.t01	Wine grape	cytosol	63.93	47.42
Bra025003.1-P	Field mustard	nucleus	40.98	44.25
Bra017531.1-P	Field mustard	nucleus	40.98	43.67
Bra022055.1-P	Field mustard	nucleus	39.75	43.5
Bra022058.1-P	Field mustard	nucleus	40.57	43.23
Bra023280.1-P	Field mustard	mitochondrion	47.54	40.99
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	28.69	29.17
Bra037203.1-P	Field mustard	cytosol	30.33	29.02
Bra014899.1-P	Field mustard	nucleus	29.1	28.86
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	26.64	28.26
Bra014478.1-P	Field mustard	cytosol	28.69	28.23
Bra013149.1-P	Field mustard	cytosol	30.33	26.71
Bra023155.1-P	Field mustard	nucleus	21.72	16.31

Protein Annotations

EnsemblPlants:Bra025865.1	EnsemblPlants:Bra025865.1-P	EnsemblPlantsGene:Bra025865	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF12
PFAM:PF04640	SUPFAM:SSF57845	UniParc:UPI000253F04F	UniProt:M4EAQ6	MapMan:15.5.43	:

Description

AT1G21000 (E=3e-137) | zinc-binding family protein

Coordinates

chrA06:+:8572630..8573686

Molecular Weight (calculated)

27453.7 Da

IEP (calculated)

8.785

GRAVY (calculated)

-0.545

Length

244 amino acids

Sequence
(BLAST)

001: MIRTEEQEDD YMSPPWLMPM LRGSYFVPCS IHADSNKNEC NLFCLDCAGN AFCSYCLVKH KDHRVVQIRR SSYHNVVRVN EIQKYIDISC VQTYIINSAK
101: IVFLNERPQP RIGKGVTNTC EICCRSLLDS FRFCSLGCKL GGMKRGDQSL TFSLRGKHGR EYQGGSESDE ATTPTKLRKT NAFNRLMSGL SISTVRLDDY
201: GPGGDQRSLS SGDEGGFSFS PGTPPIYNHR NSSRRKGIPH RAPF

Best Arabidopsis Sequence Match ( AT1G21000.2 )
(BLAST)

001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF

Arabidopsis Description

At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.