Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37203 | Canola | cytosol | 100.0 | 100.0 |
| CDX81439 | Canola | cytosol | 95.69 | 95.31 |
| AT2G12646.1 | Thale cress | nucleus | 87.84 | 87.5 |
| Bra013149.1-P | Field mustard | cytosol | 91.37 | 84.12 |
| KRH37851 | Soybean | nucleus | 64.71 | 69.04 |
| KRH12861 | Soybean | nucleus | 64.31 | 68.62 |
| KRH20236 | Soybean | nucleus | 66.27 | 68.42 |
| KRH03576 | Soybean | nucleus | 66.27 | 68.15 |
| PGSC0003DMT400020401 | Potato | cytosol | 63.14 | 65.45 |
| Solyc12g010470.1.1 | Tomato | cytosol | 62.75 | 65.04 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 61.96 | 64.49 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 59.61 | 64.14 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 59.61 | 64.14 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 59.61 | 64.14 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 59.22 | 63.71 |
| Solyc07g007320.1.1 | Tomato | cytosol | 63.53 | 63.53 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 58.43 | 62.87 |
| Zm00001d015560_P001 | Maize | nucleus | 58.04 | 62.45 |
| KXG29636 | Sorghum | nucleus | 57.65 | 62.03 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 57.25 | 58.87 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 52.16 | 53.2 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 57.65 | 51.76 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 56.86 | 50.88 |
| Bra014478.1-P | Field mustard | cytosol | 42.35 | 43.55 |
| Bra007550.1-P | Field mustard | extracellular, nucleus, vacuole | 39.22 | 43.48 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 38.82 | 41.25 |
| Bra014899.1-P | Field mustard | nucleus | 39.61 | 41.06 |
| Bra003715.1-P | Field mustard | nucleus | 24.71 | 38.18 |
| Bra012632.1-P | Field mustard | nucleus | 30.98 | 36.92 |
| Bra035494.1-P | Field mustard | nucleus | 30.98 | 36.07 |
| Bra034379.1-P | Field mustard | nucleus | 26.67 | 35.6 |
| Bra022055.1-P | Field mustard | nucleus | 30.98 | 35.43 |
| Bra021029.1-P | Field mustard | nucleus | 30.98 | 35.27 |
| Bra013266.1-P | Field mustard | nucleus | 31.37 | 35.24 |
| Bra025003.1-P | Field mustard | nucleus | 30.2 | 34.07 |
| Bra022058.1-P | Field mustard | nucleus | 30.59 | 34.06 |
| Bra017531.1-P | Field mustard | nucleus | 30.59 | 34.06 |
| Bra011992.1-P | Field mustard | nucleus | 25.1 | 33.86 |
| Bra012263.1-P | Field mustard | cytosol | 24.71 | 31.66 |
| Bra015731.1-P | Field mustard | nucleus | 29.02 | 31.09 |
| Bra025865.1-P | Field mustard | cytosol | 29.02 | 30.33 |
| Bra016441.1-P | Field mustard | cytosol | 28.24 | 29.63 |
| Bra023280.1-P | Field mustard | mitochondrion | 30.98 | 27.92 |
| Bra023155.1-P | Field mustard | nucleus | 30.59 | 24.0 |
Protein Annotations
Description
AT2G12646 (E=4e-136) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: zinc-binding protein, putative (TAIR:AT3G60670.1); Has 191 Blast hits to 191 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 191; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA09:-:3959549..3961353
Molecular Weight (calculated)
28948.8 Da
IEP (calculated)
8.480
GRAVY (calculated)
-0.420
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGKGKNGIM KPAWLDALYA EKFFVGCPYH ETAKKNEKNV CCLDCCISLC PHCVPSHRYH RLLQVRRYVY HEVIRLEDLQ KLIDCSNVQA YTINSAKVVF
101: IKKRPQNRQF KGAGNYCTSC DRSLQEPFIH CSLGCKVEFV MKRYRDITPF IKPCHTLTLG PDYIIPQDLH ADDNMAAYET PRSTVVDGDD SMGWSSTSSE
201: LGDAATTTHV VRKKRTGFCF CAKSANSYKI VSEDPDDISN CINRRKGIPQ RSPLC
101: IKKRPQNRQF KGAGNYCTSC DRSLQEPFIH CSLGCKVEFV MKRYRDITPF IKPCHTLTLG PDYIIPQDLH ADDNMAAYET PRSTVVDGDD SMGWSSTSSE
201: LGDAATTTHV VRKKRTGFCF CAKSANSYKI VSEDPDDISN CINRRKGIPQ RSPLC
001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.