Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G134200.1 | Wheat | nucleus | 99.58 | 99.58 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 98.31 | 98.31 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 98.31 | 98.31 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 93.25 | 93.25 |
| Zm00001d015560_P001 | Maize | nucleus | 91.98 | 91.98 |
| KXG29636 | Sorghum | nucleus | 91.98 | 91.98 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 73.84 | 70.56 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 71.31 | 68.98 |
| KRH37851 | Soybean | nucleus | 67.93 | 67.36 |
| KRH12861 | Soybean | nucleus | 67.93 | 67.36 |
| KRH20236 | Soybean | nucleus | 70.04 | 67.21 |
| KRH03576 | Soybean | nucleus | 70.04 | 66.94 |
| Solyc07g007320.1.1 | Tomato | cytosol | 71.31 | 66.27 |
| PGSC0003DMT400020401 | Potato | cytosol | 67.51 | 65.04 |
| Solyc12g010470.1.1 | Tomato | cytosol | 67.09 | 64.63 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 76.79 | 64.08 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 66.67 | 63.2 |
| AT2G12646.1 | Thale cress | nucleus | 66.67 | 61.72 |
| CDY37203 | Canola | cytosol | 64.14 | 59.61 |
| Bra037203.1-P | Field mustard | cytosol | 64.14 | 59.61 |
| CDX81439 | Canola | cytosol | 63.71 | 58.98 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 70.46 | 58.6 |
| Bra013149.1-P | Field mustard | cytosol | 64.98 | 55.6 |
| CDX93111 | Canola | cytosol | 64.98 | 55.6 |
| CDX89603 | Canola | cytosol | 64.56 | 55.23 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 46.84 | 43.36 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 29.11 | 34.85 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 29.96 | 32.87 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 29.54 | 32.56 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 29.54 | 32.56 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 21.94 | 32.3 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 28.27 | 31.75 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 31.22 | 30.08 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 29.96 | 29.34 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 30.38 | 29.03 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 29.11 | 26.85 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 28.27 | 25.09 |
| TraesCS1B01G086700.1 | Wheat | cytosol, nucleus, plastid | 24.05 | 22.18 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G173400.1 | EnsemblPlantsGene:TraesCS6B01G173400 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF11 | PFAM:PF04640 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:187831500..187833084
Molecular Weight (calculated)
27263.6 Da
IEP (calculated)
8.382
GRAVY (calculated)
-0.541
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQQAMWKPA WLEALSTEKF FVACSFHEHA KKNEKNICCL DCCTSICPHC VSTHRVHRLL QVRRYVYHDV VRLEDLEKLI DCSGVQSYTI NSSKVVFLKK
101: RPQNRQFKGS GNICTSCDRS LQEPYFYCSL DCKVEYILRK KKDLSAYLRP CKTLQLGPDF FIPHDADDET TQSTLVDVDE PMGSSDSDNL SIPYTNFVRK
201: KRSGPYICAR SANRVSDDDM ATNMSRRKGV PQRSPLC
101: RPQNRQFKGS GNICTSCDRS LQEPYFYCSL DCKVEYILRK KKDLSAYLRP CKTLQLGPDF FIPHDADDET TQSTLVDVDE PMGSSDSDNL SIPYTNFVRK
201: KRSGPYICAR SANRVSDDDM ATNMSRRKGV PQRSPLC
001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.