Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G561000.1 | Wheat | extracellular | 97.69 | 98.14 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 93.98 | 94.42 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 92.59 | 93.02 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 87.5 | 87.91 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 71.3 | 67.25 |
| Os01t0517800-01 | Rice | extracellular | 52.31 | 66.08 |
| EES15787 | Sorghum | endoplasmic reticulum | 62.04 | 62.62 |
| OQU78879 | Sorghum | endoplasmic reticulum | 60.19 | 61.03 |
| Os01t0518000-01 | Rice | cytosol | 60.65 | 60.37 |
| Zm00001d009292_P001 | Maize | extracellular | 58.33 | 58.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.46 | 50.23 |
| KRH19979 | Soybean | cytosol | 47.69 | 49.28 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 48.61 | 48.84 |
| PGSC0003DMT400022166 | Potato | extracellular | 46.3 | 48.78 |
| Solyc10g085800.1.1 | Tomato | extracellular | 46.3 | 48.78 |
| Bra034379.1-P | Field mustard | nucleus | 42.13 | 47.64 |
| CDY30518 | Canola | cytosol | 42.13 | 47.64 |
| CDY04518 | Canola | nucleus | 40.74 | 46.56 |
| Bra011992.1-P | Field mustard | nucleus | 40.74 | 46.56 |
| CDX71409 | Canola | nucleus | 40.28 | 46.28 |
| KRH32606 | Soybean | extracellular | 47.22 | 45.95 |
| KRH25132 | Soybean | cytosol | 46.76 | 45.91 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 45.83 | 44.8 |
| KRG96080 | Soybean | cytosol | 45.37 | 44.75 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 51.39 | 41.57 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 40.28 | 41.23 |
| AT2G27930.5 | Thale cress | plastid | 34.26 | 38.54 |
| KRH30543 | Soybean | nucleus | 31.94 | 38.33 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 40.28 | 37.83 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 27.31 | 36.65 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 40.74 | 36.36 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 41.67 | 36.29 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 43.06 | 36.19 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 41.2 | 36.18 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 32.87 | 29.96 |
| TraesCS1B01G086700.1 | Wheat | cytosol, nucleus, plastid | 34.26 | 28.79 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 25.46 | 27.78 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 31.02 | 26.17 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G560600.1 | EnsemblPlantsGene:TraesCS3B01G560600 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF7 | PFAM:PF04640 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:15.5.43 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:794592440..794593395
Molecular Weight (calculated)
24393.7 Da
IEP (calculated)
7.304
GRAVY (calculated)
-0.462
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGTVPTWL ELLLATQFFA ICTNHLSSTR NECNLFCIDC EESKAALCYY CCSHHHSTHR VIQIRRSSYH DVVRVAELKD VLDISDVQTY VINSATVVFL
101: NERPQQRGCG VSVVKASSSS SYNCESCNRA LLDPFRFCSL GCNLKAIKED MRTSIPTRDI IDYTRKDDDT DCSTTSGNTG NNEESCSDAD YCNERPSPPR
201: VIRHRRKGIP QRAPFY
101: NERPQQRGCG VSVVKASSSS SYNCESCNRA LLDPFRFCSL GCNLKAIKED MRTSIPTRDI IDYTRKDDDT DCSTTSGNTG NNEESCSDAD YCNERPSPPR
201: VIRHRRKGIP QRAPFY
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.