Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0517800-01 | Rice | extracellular | 54.84 | 69.59 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 61.75 | 62.33 |
| TraesCS3A01G497600.1 | Wheat | extracellular | 61.29 | 61.86 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 61.29 | 61.86 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 60.83 | 61.4 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 60.83 | 61.4 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 60.37 | 60.65 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 58.99 | 59.53 |
| EES15787 | Sorghum | endoplasmic reticulum | 56.68 | 57.48 |
| OQU78879 | Sorghum | endoplasmic reticulum | 55.76 | 56.81 |
| Zm00001d009292_P001 | Maize | extracellular | 55.76 | 56.54 |
| Os08t0560300-01 | Rice | cytosol | 46.54 | 50.5 |
| Os11t0428700-00 | Rice | cytosol | 29.03 | 48.09 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 47.0 | 47.44 |
| CDY30518 | Canola | cytosol | 41.47 | 47.12 |
| Bra034379.1-P | Field mustard | nucleus | 41.47 | 47.12 |
| Solyc10g085800.1.1 | Tomato | extracellular | 44.24 | 46.83 |
| PGSC0003DMT400022166 | Potato | extracellular | 44.24 | 46.83 |
| CDX71409 | Canola | nucleus | 40.55 | 46.81 |
| Bra011992.1-P | Field mustard | nucleus | 40.55 | 46.56 |
| CDY04518 | Canola | nucleus | 40.55 | 46.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.54 | 46.54 |
| KRH19979 | Soybean | cytosol | 44.24 | 45.93 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 45.62 | 43.23 |
| KRH25132 | Soybean | cytosol | 43.78 | 43.18 |
| KRH32606 | Soybean | extracellular | 43.78 | 42.79 |
| KRG96080 | Soybean | cytosol | 42.4 | 42.01 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 42.4 | 41.63 |
| AT2G27930.5 | Thale cress | plastid | 33.64 | 38.02 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 38.25 | 36.09 |
| Os06t0624900-01 | Rice | cytosol | 41.94 | 35.97 |
| KRH30543 | Soybean | nucleus | 29.49 | 35.56 |
| Os10t0574700-01 | Rice | nucleus | 41.01 | 35.04 |
| Os04t0591100-01 | Rice | nucleus | 40.09 | 34.94 |
| Os02t0692700-01 | Rice | nucleus | 40.09 | 33.85 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 30.88 | 28.27 |
| Os02t0172800-01 | Rice | cytosol | 28.57 | 25.73 |
| Os02t0661400-00 | Rice | cytosol | 24.42 | 23.45 |
| Os06t0666100-01 | Rice | nucleus | 28.11 | 23.37 |
Protein Annotations
| EMBL:AK242682 | EnsemblPlants:Os01t0518000-01 | EnsemblPlantsGene:Os01g0518000 | EntrezGene:4323973 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 |
| InterPro:Znf_B-box | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF7 | PFAM:PF04640 | ProteinID:BAF05115.2 | ProteinID:BAS72426.1 |
| ProteinID:EEE54691.1 | RefSeq:XP_015647263.1 | UniParc:UPI000188AFD4 | UniProt:B7F9M2 | MapMan:15.5.43 | : |
Description
Protein of unknown function DUF597 family protein. (Os01t0518000-01)
Coordinates
chr1:-:18374765..18376668
Molecular Weight (calculated)
24432.7 Da
IEP (calculated)
8.354
GRAVY (calculated)
-0.432
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGESVPSW VELLLSTQFF TTCSSHLISP RNECNFFCID CQTPQASFCY YCRLSHHSSH HVIQIRRSSY HDVVKVSELE DILDISDVQT YVINSSRVVY
101: LTERPQLRSC GVSNTKLSSS QTYKCEICSR TLLDDFRFCS LGCNFAAIKR DNEKNVAQNG IASNANEVKI GTNNGSTNAG SANEISSDAN NYRNEIPSST
201: RVIRHRRKGI PRRAPFF
101: LTERPQLRSC GVSNTKLSSS QTYKCEICSR TLLDDFRFCS LGCNFAAIKR DNEKNVAQNG IASNANEVKI GTNNGSTNAG SANEISSDAN NYRNEIPSST
201: RVIRHRRKGI PRRAPFF
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.