Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011992.1-P | Field mustard | nucleus | 96.81 | 96.3 |
| CDY04518 | Canola | nucleus | 96.28 | 95.77 |
| CDY30518 | Canola | cytosol | 85.64 | 84.29 |
| AT2G27930.5 | Thale cress | plastid | 71.81 | 70.31 |
| Solyc10g085800.1.1 | Tomato | extracellular | 57.98 | 53.17 |
| PGSC0003DMT400022166 | Potato | extracellular | 57.98 | 53.17 |
| KRH19979 | Soybean | cytosol | 59.04 | 53.11 |
| KRG96080 | Soybean | cytosol | 61.7 | 52.97 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 60.11 | 51.13 |
| KRH32606 | Soybean | extracellular | 60.11 | 50.9 |
| KXG25377 | Sorghum | extracellular | 55.32 | 49.29 |
| Zm00001d031925_P001 | Maize | cytosol | 55.32 | 49.06 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 54.26 | 47.66 |
| Os08t0560300-01 | Rice | cytosol | 50.53 | 47.5 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.79 | 47.47 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 54.26 | 47.44 |
| Os01t0517800-01 | Rice | extracellular | 43.09 | 47.37 |
| EES15787 | Sorghum | endoplasmic reticulum | 50.0 | 43.93 |
| Os11t0428700-00 | Rice | cytosol | 30.32 | 43.51 |
| Zm00001d009292_P001 | Maize | extracellular | 49.47 | 43.46 |
| HORVU7Hr1G059900.4 | Barley | cytosol | 49.47 | 43.26 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 48.94 | 42.79 |
| CDY33661 | Canola | cytosol | 54.79 | 42.39 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 48.4 | 42.33 |
| OQU78879 | Sorghum | endoplasmic reticulum | 47.87 | 42.25 |
| CDY01340 | Canola | cytosol | 52.13 | 42.06 |
| TraesCS3A01G497600.1 | Wheat | extracellular | 47.87 | 41.86 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 47.87 | 41.86 |
| CDX68093 | Canola | nucleus | 53.19 | 41.84 |
| CDX87583 | Canola | nucleus | 52.66 | 41.6 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 47.34 | 41.4 |
| CDX88300 | Canola | nucleus | 52.13 | 41.35 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 46.81 | 40.93 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 50.0 | 40.87 |
| CDY29486 | Canola | cytosol | 52.66 | 40.57 |
| CDY04591 | Canola | cytosol | 52.66 | 40.57 |
| Os01t0518000-01 | Rice | cytosol | 46.81 | 40.55 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 46.28 | 40.28 |
| CDY00356 | Canola | cytosol | 51.6 | 39.75 |
| CDY01500 | Canola | nucleus | 45.21 | 39.72 |
| CDX90437 | Canola | nucleus | 44.68 | 39.25 |
| CDX85958 | Canola | nucleus | 52.13 | 39.2 |
| CDX96610 | Canola | cytosol | 54.26 | 38.64 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 54.26 | 38.35 |
| CDY44504 | Canola | nucleus | 46.28 | 38.33 |
| CDX78810 | Canola | nucleus | 46.28 | 38.33 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 54.26 | 38.2 |
| CDY72135 | Canola | cytosol, nucleus | 43.09 | 37.67 |
| CDY66745 | Canola | nucleus | 44.68 | 37.67 |
| CDY08880 | Canola | nucleus | 44.68 | 37.5 |
| CDX76551 | Canola | nucleus | 44.68 | 37.5 |
| CDY03199 | Canola | nucleus | 43.62 | 36.44 |
| CDY35177 | Canola | nucleus | 44.15 | 36.24 |
| CDX87686 | Canola | nucleus | 44.15 | 35.93 |
| CDY69910 | Canola | nucleus | 42.55 | 35.4 |
| CDY69918 | Canola | nucleus | 42.55 | 35.4 |
| CDX87684 | Canola | nucleus | 44.15 | 35.32 |
| CDX98234 | Canola | cytosol | 30.85 | 33.72 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 47.87 | 31.69 |
| CDY44664 | Canola | plasma membrane | 47.87 | 30.61 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 36.17 | 29.69 |
| CDY27171 | Canola | nucleus | 37.23 | 29.17 |
| CDY12444 | Canola | nucleus | 37.23 | 29.17 |
| CDY36264 | Canola | nucleus | 28.19 | 27.6 |
| CDY06424 | Canola | cytosol | 32.98 | 27.19 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 32.98 | 26.96 |
| CDY02353 | Canola | mitochondrion, nucleus | 26.06 | 26.49 |
| CDX71792 | Canola | cytosol | 34.04 | 26.34 |
| CDY09414 | Canola | cytosol | 30.32 | 25.91 |
| CDY43172 | Canola | nucleus | 27.66 | 25.87 |
| CDX89067 | Canola | cytosol | 33.51 | 25.4 |
| CDY48369 | Canola | cytosol | 33.51 | 25.3 |
| CDY17645 | Canola | nucleus | 30.85 | 24.89 |
| CDY37203 | Canola | cytosol | 33.51 | 24.71 |
| CDX81439 | Canola | cytosol | 33.51 | 24.61 |
| CDX93111 | Canola | cytosol | 33.51 | 22.74 |
| CDX89603 | Canola | cytosol | 33.51 | 22.74 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 43.62 | 22.53 |
Protein Annotations
| EnsemblPlants:CDX71409 | EnsemblPlantsGene:GSBRNA2T00148236001 | InterPro:DUF597 | ncoils:Coil | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF33 |
| PFAM:PF04640 | ProteinID:CDX71409 | ProteinID:CDX71409.1 | SEG:seg | UniParc:UPI0004EF4CD6 | MapMan:15.5.43 |
Description
BnaC04g16440D
Coordinates
chrLK031793:-:615568..616582
Molecular Weight (calculated)
21785.0 Da
IEP (calculated)
9.102
GRAVY (calculated)
-0.789
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKWLEALL RTNYFNICPR HCETPRNECN MFCLSCQNAA FCIYCRTSLH IDHPVLQIRR SSYHNVVRVS EIEKALDIRG VQNYVINSAR VLFLNERPQP
101: KNSSHGATSS TTKTISYFCE TCCRTLLDPA RFCSLGCKAE GMRKNKEEEE ERLRKERQQE THKGTHPPTH TSNSRRRKGT PHRAPFAS
101: KNSSHGATSS TTKTISYFCE TCCRTLLDPA RFCSLGCKAE GMRKNKEEEE ERLRKERQQE THKGTHPPTH TSNSRRRKGT PHRAPFAS
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.