Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17645 | Canola | nucleus | 95.31 | 78.54 |
| CDY09414 | Canola | cytosol | 82.29 | 71.82 |
| AT2G01818.1 | Thale cress | nucleus | 80.73 | 69.82 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 55.73 | 43.5 |
| PGSC0003DMT400075780 | Potato | nucleus | 45.83 | 43.14 |
| Solyc04g008090.2.1 | Tomato | cytosol | 45.31 | 40.85 |
| CDX98234 | Canola | cytosol | 27.08 | 30.23 |
| KRH49692 | Soybean | nucleus | 35.42 | 30.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.81 | 29.44 |
| KRH60448 | Soybean | nucleus | 36.46 | 29.41 |
| KRH41746 | Soybean | nucleus | 35.94 | 28.99 |
| CDY01500 | Canola | nucleus | 31.77 | 28.5 |
| CDX71409 | Canola | nucleus | 27.6 | 28.19 |
| CDY30518 | Canola | cytosol | 27.6 | 27.75 |
| CDX90437 | Canola | nucleus | 30.73 | 27.57 |
| CDY04518 | Canola | nucleus | 27.08 | 27.51 |
| CDY69910 | Canola | nucleus | 31.77 | 26.99 |
| CDY69918 | Canola | nucleus | 31.77 | 26.99 |
| CDY44504 | Canola | nucleus | 31.77 | 26.87 |
| CDX78810 | Canola | nucleus | 31.77 | 26.87 |
| CDY03199 | Canola | nucleus | 31.25 | 26.67 |
| CDY35177 | Canola | nucleus | 31.77 | 26.64 |
| CDX76551 | Canola | nucleus | 30.73 | 26.34 |
| CDY66745 | Canola | nucleus | 30.21 | 26.01 |
| CDY08880 | Canola | nucleus | 30.21 | 25.89 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 30.73 | 25.65 |
| CDY72135 | Canola | cytosol, nucleus | 28.65 | 25.58 |
| CDX87686 | Canola | nucleus | 30.73 | 25.54 |
| CDY27171 | Canola | nucleus | 31.77 | 25.42 |
| CDY12444 | Canola | nucleus | 31.25 | 25.0 |
| CDX89067 | Canola | cytosol | 32.29 | 25.0 |
| CDY48369 | Canola | cytosol | 32.29 | 24.9 |
| CDX71792 | Canola | cytosol | 31.25 | 24.69 |
| CDX87684 | Canola | nucleus | 30.21 | 24.68 |
| EES07500 | Sorghum | nucleus | 25.0 | 24.0 |
| CDY02353 | Canola | mitochondrion, nucleus | 22.92 | 23.78 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 25.0 | 23.65 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 25.0 | 23.65 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 23.96 | 23.23 |
| Zm00001d051376_P001 | Maize | cytosol | 23.96 | 23.23 |
| CDY01340 | Canola | cytosol | 28.12 | 23.18 |
| CDY37203 | Canola | cytosol | 30.73 | 23.14 |
| CDX81439 | Canola | cytosol | 30.73 | 23.05 |
| CDY29486 | Canola | cytosol | 29.17 | 22.95 |
| CDY04591 | Canola | cytosol | 29.17 | 22.95 |
| CDY43172 | Canola | nucleus | 23.96 | 22.89 |
| CDX88300 | Canola | nucleus | 28.12 | 22.78 |
| CDX87583 | Canola | nucleus | 28.12 | 22.69 |
| CDY33661 | Canola | cytosol | 28.65 | 22.63 |
| CDX68093 | Canola | nucleus | 28.12 | 22.59 |
| Os02t0661400-00 | Rice | cytosol | 26.56 | 22.57 |
| CDY00356 | Canola | cytosol | 28.12 | 22.13 |
| CDX93111 | Canola | cytosol | 31.25 | 21.66 |
| CDX89603 | Canola | cytosol | 31.25 | 21.66 |
| CDX96610 | Canola | cytosol | 29.17 | 21.21 |
| CDX85958 | Canola | nucleus | 27.6 | 21.2 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 30.73 | 20.77 |
| CDY44664 | Canola | plasma membrane | 30.73 | 20.07 |
| CDY06424 | Canola | cytosol | 21.35 | 17.98 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 26.04 | 13.74 |
Protein Annotations
| EnsemblPlants:CDY36264 | EnsemblPlantsGene:GSBRNA2T00060227001 | GO:A0A078HFS1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF15 | PFAM:PF04640 | PFscan:PS50119 | ProteinID:CDY36264 | ProteinID:CDY36264.1 |
| SEG:seg | UniParc:UPI0004EF241E | UniProt:A0A078HFS1 | MapMan:15.5.43 | : | : |
Description
BnaC07g21180DBnaC07g21180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFS1]
Coordinates
chrLK032371:-:374369..375723
Molecular Weight (calculated)
22200.5 Da
IEP (calculated)
9.066
GRAVY (calculated)
-0.715
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLRKNEKNV FCIDCNIEIC RHCCNTEAHS VHRRLQICKY VYQDVLRLLD IQHYFDCSEI QTYKINGEKA IHLNSRPQAK DARPSTKSKN AASCVTCKRY
101: IQDRPNRFCS ISCKISSGPP KKRKFCFSSE VEQGVLEKEH YNQEGSLEEK KSSISSLTDV SEDSEALLSN LSLRPFTRLF KRKGISQRSP LH
101: IQDRPNRFCS ISCKISSGPP KKRKFCFSSE VEQGVLEKEH YNQEGSLEEK KSSISSLTDV SEDSEALLSN LSLRPFTRLF KRKGISQRSP LH
001: MNLSEKRRSE EVWIETLLNS EFFGICMNHK YLRKNEKNVF CIDCNVEICR HCCNTVTDSH FLHRRLQICK YVYQDVIRLL EIQNYFDCSE IQTYKINGEK
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A8MQN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.