Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12444 | Canola | nucleus | 97.92 | 97.92 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 97.5 | 97.5 |
| CDY02353 | Canola | mitochondrion, nucleus | 65.42 | 84.86 |
| CDX98234 | Canola | cytosol | 58.33 | 81.4 |
| CDY43172 | Canola | nucleus | 65.42 | 78.11 |
| KRH42391 | Soybean | nucleus | 51.67 | 62.0 |
| KRH58510 | Soybean | nucleus | 50.42 | 60.8 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 65.0 | 59.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.42 | 59.64 |
| KRH12195 | Soybean | cytosol | 63.33 | 59.61 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 55.42 | 58.85 |
| KRH37216 | Soybean | cytosol | 62.92 | 58.53 |
| Solyc02g068510.1.1 | Tomato | cytosol | 57.5 | 57.26 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 49.17 | 55.66 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 51.25 | 53.95 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 53.33 | 52.67 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 41.67 | 52.36 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 52.92 | 52.26 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 52.92 | 52.26 |
| Os02t0172800-01 | Rice | cytosol | 50.42 | 50.21 |
| EES04603 | Sorghum | nucleus | 53.75 | 50.0 |
| EER90181 | Sorghum | cytosol | 51.25 | 49.8 |
| Zm00001d046958_P001 | Maize | nucleus | 51.67 | 49.6 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 52.08 | 49.21 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 52.08 | 49.02 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 52.08 | 48.83 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 51.67 | 48.82 |
| Os06t0666100-01 | Rice | nucleus | 52.92 | 48.66 |
| Zm00001d015394_P001 | Maize | cytosol | 52.5 | 47.73 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 38.33 | 40.0 |
| CDX89067 | Canola | cytosol | 40.42 | 39.11 |
| CDX81439 | Canola | cytosol | 41.67 | 39.06 |
| CDY48369 | Canola | cytosol | 40.42 | 38.96 |
| CDY37203 | Canola | cytosol | 41.25 | 38.82 |
| CDY30518 | Canola | cytosol | 30.83 | 38.74 |
| CDX71792 | Canola | cytosol | 38.75 | 38.27 |
| CDX71409 | Canola | nucleus | 29.17 | 37.23 |
| CDY04518 | Canola | nucleus | 29.17 | 37.04 |
| CDX89603 | Canola | cytosol | 41.67 | 36.1 |
| CDX93111 | Canola | cytosol | 41.67 | 36.1 |
| CDX90437 | Canola | nucleus | 30.42 | 34.11 |
| CDY01500 | Canola | nucleus | 30.42 | 34.11 |
| CDY03199 | Canola | nucleus | 31.67 | 33.78 |
| CDY35177 | Canola | nucleus | 32.08 | 33.62 |
| CDX76551 | Canola | nucleus | 31.25 | 33.48 |
| CDY69910 | Canola | nucleus | 31.25 | 33.19 |
| CDY08880 | Canola | nucleus | 30.83 | 33.04 |
| CDY69918 | Canola | nucleus | 30.83 | 32.74 |
| CDY44504 | Canola | nucleus | 30.83 | 32.6 |
| CDX78810 | Canola | nucleus | 30.83 | 32.6 |
| CDY72135 | Canola | cytosol, nucleus | 29.17 | 32.56 |
| CDX88300 | Canola | nucleus | 31.67 | 32.07 |
| CDX87583 | Canola | nucleus | 31.67 | 31.93 |
| CDY66745 | Canola | nucleus | 29.58 | 31.84 |
| CDY36264 | Canola | nucleus | 25.42 | 31.77 |
| CDX68093 | Canola | nucleus | 30.42 | 30.54 |
| CDY01340 | Canola | cytosol | 29.58 | 30.47 |
| CDY04591 | Canola | cytosol | 30.0 | 29.51 |
| CDY29486 | Canola | cytosol | 29.58 | 29.1 |
| CDX87686 | Canola | nucleus | 27.92 | 29.0 |
| CDX87684 | Canola | nucleus | 28.33 | 28.94 |
| CDY33661 | Canola | cytosol | 29.17 | 28.81 |
| CDX85958 | Canola | nucleus | 30.0 | 28.8 |
| CDY17645 | Canola | nucleus | 27.92 | 28.76 |
| CDY00356 | Canola | cytosol | 29.17 | 28.69 |
| CDY09414 | Canola | cytosol | 26.25 | 28.64 |
| CDX96610 | Canola | cytosol | 29.17 | 26.52 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 30.0 | 25.35 |
| CDY44664 | Canola | plasma membrane | 30.0 | 24.49 |
| CDY06424 | Canola | cytosol | 22.08 | 23.25 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 27.92 | 18.41 |
Protein Annotations
| EnsemblPlants:CDY27171 | EnsemblPlantsGene:GSBRNA2T00037035001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 |
| ProteinID:CDY27171 | ProteinID:CDY27171.1 | SEG:seg | UniParc:UPI0004EF4D53 | UniProt:A0A078GPB8 | MapMan:15.5.43 |
Description
BnaA08g08090DBnaA08g08090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPB8]
Coordinates
chrLK032200:+:554797..557341
Molecular Weight (calculated)
27788.3 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.539
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MMREGHEEED MMMMLPRKPA WLEGLMAETF FSSCGIHESR RKSEKNVFCL LCCLSVCPHC LTSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYIQPYTI
101: NGAKVIFINQ RPQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLQYQG DDLSSILYRI DESDFTFSSL RMDGHDQLGE ISTMEEDTDD IMVMSDQWEQ
201: GNNSNKKEKR KTKKESNYSP GMVLSLGSRR KGAPHRAPFS
101: NGAKVIFINQ RPQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLQYQG DDLSSILYRI DESDFTFSSL RMDGHDQLGE ISTMEEDTDD IMVMSDQWEQ
201: GNNSNKKEKR KTKKESNYSP GMVLSLGSRR KGAPHRAPFS
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.