Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G146600.1 | Wheat | cytosol | 94.24 | 94.24 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 67.08 | 72.12 |
| EES04603 | Sorghum | nucleus | 75.31 | 70.93 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 74.07 | 70.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.96 | 68.61 |
| Zm00001d015394_P001 | Maize | cytosol | 74.49 | 68.56 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 60.49 | 60.49 |
| CDX98234 | Canola | cytosol | 41.56 | 58.72 |
| Solyc02g068510.1.1 | Tomato | cytosol | 58.02 | 58.51 |
| KRH42391 | Soybean | nucleus | 46.09 | 56.0 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 57.2 | 53.26 |
| CDY12444 | Canola | nucleus | 52.26 | 52.92 |
| CDY27171 | Canola | nucleus | 52.26 | 52.92 |
| KRH58510 | Soybean | nucleus | 43.21 | 52.76 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 51.85 | 52.5 |
| AT1G31040.1 | Thale cress | nucleus | 51.44 | 51.44 |
| Bra014899.1-P | Field mustard | nucleus | 51.85 | 51.22 |
| CDY02353 | Canola | mitochondrion, nucleus | 38.68 | 50.81 |
| CDY43172 | Canola | nucleus | 40.33 | 48.76 |
| KRH12195 | Soybean | cytosol | 51.03 | 48.63 |
| KRH37216 | Soybean | cytosol | 51.03 | 48.06 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 44.44 | 45.57 |
| TraesCS3A01G497600.1 | Wheat | extracellular | 28.4 | 32.09 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 31.69 | 31.82 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 26.34 | 31.53 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 27.16 | 30.84 |
| Bra023155.1-P | Field mustard | nucleus | 40.74 | 30.46 |
| TraesCS2A01G496500.1 | Wheat | nucleus | 19.75 | 30.38 |
| TraesCS6A01G168400.1 | Wheat | cytosol | 26.75 | 30.23 |
| TraesCS2A01G496400.1 | Wheat | mitochondrion | 19.34 | 29.19 |
| TraesCS2A01G496300.1 | Wheat | mitochondrion | 25.93 | 29.03 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 28.81 | 28.46 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 29.22 | 25.82 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 27.57 | 24.81 |
| TraesCS1A01G068200.1 | Wheat | nucleus | 23.05 | 22.67 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 20.58 | 21.83 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G156600.1 | EnsemblPlantsGene:TraesCS6A01G156600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF32 | PFAM:PF04640 | PFscan:PS50119 | SEG:seg | MapMan:15.5.43 | : |
Description
No Description!
Coordinates
chr6A:-:145651357..145654637
Molecular Weight (calculated)
26345.6 Da
IEP (calculated)
8.679
GRAVY (calculated)
-0.345
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMRVPGWVG GLVEESFFVG CEAHESRRKN EKNIFCLACC TSICPHCAPA HRHHPLLQVR RYVYNDVVRL GELEKLIDCS YVQPYTINSA KVIFLKPRPQ
101: SRPFKGSGNV CLTCDRILPF HFCCLSCKVD HVVEQGGDLS NILLYRAGDE LPFPRFENLH VGDGDSGQVT SNSILENPLH HRNGYGGGSG GSSDNAGNGN
201: GNGHGGGGEP AVVKRKKGGG FFPKMVLSLG SRRKGAPTRS PLA
101: SRPFKGSGNV CLTCDRILPF HFCCLSCKVD HVVEQGGDLS NILLYRAGDE LPFPRFENLH VGDGDSGQVT SNSILENPLH HRNGYGGGSG GSSDNAGNGN
201: GNGHGGGGEP AVVKRKKGGG FFPKMVLSLG SRRKGAPTRS PLA
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.