Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27171 | Canola | nucleus | 97.92 | 97.92 |
| CDY02353 | Canola | mitochondrion, nucleus | 65.83 | 85.41 |
| CDX98234 | Canola | cytosol | 59.17 | 82.56 |
| CDY43172 | Canola | nucleus | 65.83 | 78.61 |
| KRH42391 | Soybean | nucleus | 52.08 | 62.5 |
| KRH58510 | Soybean | nucleus | 50.83 | 61.31 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 65.42 | 60.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.83 | 60.09 |
| KRH12195 | Soybean | cytosol | 63.75 | 60.0 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 55.83 | 59.29 |
| KRH37216 | Soybean | cytosol | 63.33 | 58.91 |
| Solyc02g068510.1.1 | Tomato | cytosol | 57.92 | 57.68 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 49.17 | 55.66 |
| Bra023155.1-P | Field mustard | nucleus | 74.58 | 55.08 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 51.25 | 53.95 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 53.75 | 53.09 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 41.67 | 52.36 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 52.92 | 52.26 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 52.92 | 52.26 |
| Os02t0172800-01 | Rice | cytosol | 50.83 | 50.62 |
| EES04603 | Sorghum | nucleus | 53.75 | 50.0 |
| EER90181 | Sorghum | cytosol | 51.25 | 49.8 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 52.5 | 49.61 |
| Zm00001d046958_P001 | Maize | nucleus | 51.67 | 49.6 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 52.5 | 49.41 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 52.5 | 49.22 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 52.08 | 49.21 |
| Os06t0666100-01 | Rice | nucleus | 53.33 | 49.04 |
| Zm00001d015394_P001 | Maize | cytosol | 52.5 | 47.73 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 38.75 | 40.43 |
| CDX89067 | Canola | cytosol | 40.83 | 39.52 |
| CDX81439 | Canola | cytosol | 42.08 | 39.45 |
| CDY48369 | Canola | cytosol | 40.83 | 39.36 |
| CDY37203 | Canola | cytosol | 41.67 | 39.22 |
| CDY30518 | Canola | cytosol | 30.83 | 38.74 |
| CDX71792 | Canola | cytosol | 39.17 | 38.68 |
| CDX71409 | Canola | nucleus | 29.17 | 37.23 |
| CDY04518 | Canola | nucleus | 29.17 | 37.04 |
| CDX89603 | Canola | cytosol | 42.08 | 36.46 |
| CDX93111 | Canola | cytosol | 42.08 | 36.46 |
| CDX90437 | Canola | nucleus | 30.42 | 34.11 |
| CDY01500 | Canola | nucleus | 30.42 | 34.11 |
| CDY03199 | Canola | nucleus | 31.67 | 33.78 |
| CDX76551 | Canola | nucleus | 31.25 | 33.48 |
| CDY35177 | Canola | nucleus | 31.67 | 33.19 |
| CDY08880 | Canola | nucleus | 30.83 | 33.04 |
| CDY69910 | Canola | nucleus | 30.83 | 32.74 |
| CDY44504 | Canola | nucleus | 30.83 | 32.6 |
| CDX78810 | Canola | nucleus | 30.83 | 32.6 |
| CDY72135 | Canola | cytosol, nucleus | 29.17 | 32.56 |
| CDY69918 | Canola | nucleus | 30.42 | 32.3 |
| CDY66745 | Canola | nucleus | 29.58 | 31.84 |
| CDX88300 | Canola | nucleus | 31.25 | 31.65 |
| CDX87583 | Canola | nucleus | 31.25 | 31.51 |
| CDY36264 | Canola | nucleus | 25.0 | 31.25 |
| CDX68093 | Canola | nucleus | 30.0 | 30.13 |
| CDY01340 | Canola | cytosol | 29.17 | 30.04 |
| CDY04591 | Canola | cytosol | 29.58 | 29.1 |
| CDX87686 | Canola | nucleus | 27.92 | 29.0 |
| CDX87684 | Canola | nucleus | 28.33 | 28.94 |
| CDX85958 | Canola | nucleus | 30.0 | 28.8 |
| CDY29486 | Canola | cytosol | 29.17 | 28.69 |
| CDY09414 | Canola | cytosol | 26.25 | 28.64 |
| CDY33661 | Canola | cytosol | 28.75 | 28.4 |
| CDY17645 | Canola | nucleus | 27.5 | 28.33 |
| CDY00356 | Canola | cytosol | 28.75 | 28.28 |
| CDX96610 | Canola | cytosol | 28.75 | 26.14 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 30.0 | 25.35 |
| CDY44664 | Canola | plasma membrane | 30.0 | 24.49 |
| CDY06424 | Canola | cytosol | 21.67 | 22.81 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 27.92 | 18.41 |
Protein Annotations
| EnsemblPlants:CDY12444 | EnsemblPlantsGene:GSBRNA2T00061718001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 |
| ProteinID:CDY12444 | ProteinID:CDY12444.1 | SEG:seg | UniParc:UPI0004EF3B1B | UniProt:A0A078FHG0 | MapMan:15.5.43 |
Description
BnaC08g09330DBnaC08g09330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHG0]
Coordinates
chrLK032022:+:543926..546324
Molecular Weight (calculated)
27771.3 Da
IEP (calculated)
7.186
GRAVY (calculated)
-0.530
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MMREGHDEEE MMMMLARKPA WLEGLMAETF FSSCGIHESR RKSEKNVFCL LCCLSVCPHC LTSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYIQPYTI
101: NGAKVIFINQ RPQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLQYQG DDLSSILYRI DESDFTFSSL RMDGHDQLGE ISTMEEDTDD ILVMSDQWEQ
201: GNNSNKKEKR KKKKESNYSP GMVLSLGSRR KGAPHRAPFS
101: NGAKVIFINQ RPQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLQYQG DDLSSILYRI DESDFTFSSL RMDGHDQLGE ISTMEEDTDD ILVMSDQWEQ
201: GNNSNKKEKR KKKKESNYSP GMVLSLGSRR KGAPHRAPFS
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.